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Detailed information on CNT30515141


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021494Juglans regiaCitrullus lanatus12.9920.4281.02137forward
CNT30620641Juglans regiaCajanus cajan13.5526.6884.62143forward
CNT30643648Juglans regiaCannabis sativa14.6924.6883.23155forward
CNT30332970Juglans regiaCynara cardunculus10.8121.4382.46114forward

Expression of CNT30515141

Peptides detected in this lncRNA

>peptide 1 (40 aa)
DLTEQVSLIQISPSTLIVLDTAQSISAQMIQLPQPNPNPI*

>peptide 2 (62 aa)
MDRLSGYKSLGPKTKNLVVAGGLTAFVFGVYFYTMRAVGGTDELQMAIDKFEGQKSKKEAEG*

>peptide 3 (49 aa)
MSLLFCSFKHAIRDLNQTVSCTYKPNVKCLLVWKFIYSILKSCQSQLAV*

Sequence

>CNT30515141
ATGACCTTACAGAGCAGGTTAGCCTTATCCAAATTAGCCCATCAACCCTAATAGTCTTGGACACGGCCCAATCGATCTCGGCTCAAATGATCCAACTGCC
ACAACCGAACCCAAATCCAATCTGACCCGTCATGATCACACATGGGACACGTTTGCTGTTACCGTAAGCCTTTCAATGAAATACCGAAGAAGCCACGAAA
CGATTCGCAGTGGTAGGGTTTTAAGGGGTTTTTGAGTTTTTCACTCGCAAATCTCAATCTCAATTTTTTCACTCGCAATTCTCAATCTCAATTCCAGGCT
TGAAGAGTAATCTAGAAGTGCTTTTAGTTTTTGCTTGCAAATGGATAGGCTTTCAGGATATAAGAGTCTTGGACCTAAAACAAAGAATCTTGTAGTTGCC
GGAGGCTTGACGGCATTTGTCTTTGGTGTGTACTTCTATACCATGAGAGCTGTTGGAGGTACAGATGAACTACAGATGGCTATAGATAAGTTTGAAGGGC
AGAAAAGCAAGAAAGAGGCTGAGGGTTGAAGCAAGCATGTCACCAAAGGTTTAATCTTGTAACCAGTTTTATAATAAAGTAATCATGGACACGGCTGAAT
GTATTTTGTGAAACAGATCATATGAGTCTGTTGTTTTGTTCCTTCAAACATGCGATCAGAGATTTAAACCAAACTGTTTCATGTACATATAAACCAAATG
TCAAATGCCTGCTTGTGTGGAAGTTCATTTATAGCATATTGAAGAGCTGCCAGTCGCAATTGGCAGTATAAAACATTTGATTTATTATCAATGTGGAGTT
TTTCATCAGATTATATCAGGCGCTGAAATCCAAGAACTACCCAGTTTGCAGACGTTAAGAATCGTTGATTGCTTCACACTTGAGAAATCTTCAAAAACAA
ATGCGGCAGATAACAGTTGAGTTGCTTATCTTCAGTCATTCCCGTCAGTGAACATGAACATTCTTCTACAGGCCTCCTTTCAATTACACGACTCATGTTG
GAAGACCACCGTGGCTTCGAGTCTCATCAGTTAAAATAAATGCCAAATTGCTCTT