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Detailed information on CNT30515134


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30315075Juglans regiaCorylus avellana24.0851.6989.67184forward
CNT30570730Juglans regiaVitis vinifera24.0814.288.59184forward

Expression of CNT30515134

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MGMFMHGQTTKRLVPPDQLHVLFQVLTLARLKSKEFFSFGSKIILIGTV

>peptide 2 (30 aa)
MGSRTAELSQHTTASLTGARFGFHGQISLR*

Sequence

>CNT30515134
AATCACCATGTGAGCTGTTATTACCAACTGTAATCTTATTTATTTTCAAATTACTATGTGAATGTGGACAGGGATAAAAGTGACTTTAAATGGGCAGGCA
CCGGAAGACATAATTATTGAAGGGGATCAAAAGAAAAGGTAGTCATCAGCATATCGATTCCAAGTCTCTTCCCTGAATTCACTCTGGCTTCCCTTTTTTG
CCTCTTTTTTGTCATCTGATCTGGAAAGAAGGGAGGGAGTTCCTATTATTGTATAAAGAGATTCGACTCTTCCTCAGATGGGGTCACGGACAGCTGAGCT
AAGCCAACATACTACAGCGAGCTTAACAGGTGCTCGGTTCGGTTTCCATGGCCAGATATCTCTTCGTTGAATGGGAATTCGAATTTTGCTTCCCTTTTGC
CTGTTTTTGTATATATTTATATTTCGTGTAACAAGTTGAGCTGTGGACAGGGGCCAGCGAAGGTCTGTAAGCTGGGTACAAGCGGCCCGTGTCAGAGCTG
AGAGCGAGAGCGAGAGCGAAAGAGAGAGATAGAGCGAGAGGTTCTTTTGGGAGAGAGAGTTAGATTTTTCCTCAGTATAATGTTTGGATCTGTTGTCTCA
GACTGTGGCAGCAAAAATGGGGATGTTTATGCATGGCCAAACTACAAAAAGATTAGTTCCTCCTGATCAACTCCATGTTCTCTTTCAGGTGCTGACTCTG
GCTCGTTTGAAGAGTAAAGAATTCTTTTCTTTTGGGTCAAAAATCATCCTAATCGGGACAGTGG