Detailed information on CNT30515079


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670613Juglans regiaSetaria viridis31.4541.4980.12161forward
CNT30639803Juglans regiaNymphaea colorata27.5426.2181.56141forward
CNT30636687Juglans regiaCapsicum annuum28.1218.1679.86144reverse complement
CNT30302990Juglans regiaTriticum aestivum36.5265.8580.75187forward
CNT309074Juglans regiaZea mays14.8426.3985.5376forward
CNT30217218Juglans regiaKalanchoe fedtschenkoi26.9526.5485.51138forward
CNT30416361Juglans regiaPapaver somniferum21.2923.6481.65109forward

Expression of CNT30515079

Peptides detected in this lncRNA

>peptide 1 (89 aa)
MYRAAVAHPVTILTHTDGQPTSTNFPLSPTEVDHPVRSIAEYILAREKIIWKKEYEYVTGLLSNGSSGFPAPTSGNIKIKMFFFFVVDI*

>peptide 2 (46 aa)
RHLGHATSMTNHSFYTLNKHPSVVGTKQHTCHKFSWRLQIIILYRH*

>peptide 3 (31 aa)
ASRSCHLHDKPFFLYIKQTSFRSGYETAHMP*

Sequence

>CNT30515079
AGGCATCTCGGTCATGCCACCTCCATGACAAACCATTCTTTTTATACATTAAACAAACATCCTTCCGTAGTGGGTACGAAACAGCACACATGCCATAAGT
TCAGTTGGCGATTGCAAATAATAATTCTATATAGGCATTGATATCAAACCGTTTCTTTGGAGGTGCTCAGAACTCCCTTTCTGGGAACATAATAGGAGCA
ACCAGAGACCAGATGTACAGAGCTGCAGTTGCCCACCCCGTCACAATCCTGACCCATACAGACGGCCAGCCAACATCGACCAACTTCCCGCTCTCCCCAA
CTGAAGTCGACCACCCAGTTAGAAGCATAGCTGAATACATACTAGCAAGGGAGAAAATAATATGGAAGAAGGAATATGAATATGTGACTGGCTTGTTGTC
CAATGGAAGCAGCGGCTTCCCTGCACCTACATCAGGAAACATCAAAATAAAAATGTTTTTTTTTTTCGTTGTTGACATTTAACATCAAAATTAAATTCTT
GGTGGCATGGAG