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Detailed information on CNT30514732


BLAST search results

BLAST vs Swiss-Prot:
sp|O22077|RBS_FAGCR, E-value = 7e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372132Juglans regiaArabidopsis thaliana20.9928.7983.33186forward
CNT30310235Juglans regiaCamelina sativa20.9921.8382.8186forward
CNT3059910Juglans regiaArabidopsis lyrata20.9935.582.8186forward
CNT3074948Juglans regiaBrassica juncea20.9926.7681.18186forward
CNT30261376Juglans regiaBrassica rapa20.9946.580.65186forward
CNT30605276Juglans regiaGossypium raimondii20.4345.8287.29181forward
CNT30715955Juglans regiaMalus domestica golden9.3730.0786.7583forward
CNT30479552Juglans regiaArabidopsis halleri20.9932.481.72186forward
CNT30355748Juglans regiaLactuca sativa20.236.3882.12179forward
CNT30319154Juglans regiaAsparagus officinalis31.1540.9579.35276forward
CNT30725197Juglans regiaLupinus angustifolius20.8826.282.7185forward
CNT30115242Juglans regiaEutrema salsugineum11.5120.3685.29102forward

Expression of CNT30514732

Peptides detected in this lncRNA

>peptide 1 (81 aa)
MQERKGIQLDVAWRLVGNETDALHLALVVKSNDTNECIGVFLLALLKLFQDLRRVGAAKHGELPHYPVATIVVPWRSACRQ*

>peptide 2 (34 aa)
MKLMHCTWRLLSNPMIRTNALGYSFLHSSSSFRT*

>peptide 3 (34 aa)
MKLMHCTWRLLSNPMIRTNALGYSFLHSSSSFRT*

>peptide 4 (53 aa)
MAALAGEALLTEAIAVDEMMEEAIFYVYRPHTALALGTLLKGFCLLIVSTLIEQ

>peptide 5 (43 aa)
MHWGIPSCTPQALSGPEKSRCSQTWGASTLPSSDHRSTLEICL*

>peptide 6 (65 aa)
MHWGIPSCTPQALSGPEKSRCSQTWGASTLPSSDHRSTLEIYCSHVGNITSNSNSKQGIHPLRIR*

Sequence

>CNT30514732
TAAGAATTCAAATGTCTGGAGTACGTTGAAAGACAAAACATGAACTTCAATCGCAACAAATTAAAAGCTAGCAAGACATGCAGGAAAGAAAAGGGATTCA
ATTAGACGTGGCTTGGAGGCTTGTAGGCAATGAAACTGATGCACTGCACTTGGCGCTTGTTGTCAAATCCAATGATACGAACGAATGCATTGGGGTATTC
CTTCTTGCACTCCTCAAGCTCTTTCAGGACCTGAGAAGAGTCGGTGCAGCCAAACATGGGGAGCTTCCACATTACCCAGTAGCGACCATCGTAGTACCCT
GGAGATCTGCTTGTAGGCAATGAAACTGATGCACTGCACTTGGCGCTTGTTGTCAAATCCAATGATACGAACGAATGCATTGGGGTATTCCTTCTTGCAC
TCCTCAAGCTCTTTCAGGACCTGAGAAGAGTCGGTGCAGCCAAACATGGGGAGCTTCCACATTACCCAGTAGCGACCATCGTAGTACCCTGGAGATCTAT
TGTTCTCACGTTGGAAACATCACCTCCAACTCGAACTCCAAACAAGGAATCCATCCCTTGCGAATCAGATAATCCACTTCCTTGGCCAATGATTCAGCAG
TGAGAGGAGGTAGGTAAGAGAGAGTCTCAAACTTCTTCTTTCCAAGTGGAGGTAATATCAGTGTTGTGTTTGCGGGTGACAGGGAAGGCCGAGGCCGACT
TGAGACCGGTGAAAGGTGCGACCATGGCAGCTTTAGCCGGAGAGGCTCTGTTAACCGAGGCAATAGCCGTGGATGAGATGATGGAGGAAGCCATTTTCTA
TGTTTACCGACCACACACAGCTTTGGCTTTGGGAACACTTTTGAAAGGCTTTTGCTTGCTGATTGTTTCGACTCTTATAGAACAGA