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Detailed information on CNT30514610


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30402810Juglans regiaBeta vulgaris6.8127.0488.5496forward
CNT30560302Juglans regiaActinidia chinensis17.8920.1482.54252forward

Expression of CNT30514610

Peptides detected in this lncRNA

>peptide 1 (39 aa)
SLSSSRCLYIQCGKYVSLVRPVSASILFVPPTISKTIIP*

>peptide 2 (31 aa)
MIYSTLEIEKNEFLSLQMTSKLGRPQKDSCS*

Sequence

>CNT30514610
GTTCTTTATCTAGCTCAAGGTGCTTGTATATCCAATGTGGAAAGTATGTTTCACTGGTAAGACCAGTCTCAGCATCTATATTATTCGTACCCCCAACCAT
TTCTAAAACCATCATTCCGTAGCTATAAACATCAGATTTATGAGAGACCCCTCCAAAAATTCTACAAAATAGTTCCGGAGCTATATATCCCACCGTCCCT
CTTGCACCCAACATTGATATGATACTCTTTTCTCTTGGGCATATTTTTGAAAGGCCAAAATCAGAAATCTTTGGACAGAAGTTCGCATCTAGAAGAATGT
TGTGAGGCTTAATGTCAAAATGCAAGATTCTTGTGTTACAACCTCTATGCACATCAACCGAAGACTGGCACGATCTTGAAGAATAGTTTTGCTCCAGTAC
TTCCTTGTGGAAAGTGGCGAAAGAATATAGATGGAAACTTTTGCTAGCACACTCTATTTCATATATAGGGTAATCAGGAAATGATGTGCAGTTGTAGAAG
ATGGAGAAATCACTATTATCCGAACTAAGATCCAATTGAGTTCGATGGATGCTGATATTGTGCAAAGGAGCAGGGCATGTGTCCTTATAGGCAGCAGCAT
TGGCGACTAGCAATGAATAGTTGGCGTAAAAGATATCCTTAATGATATACTCGACATTGGAAATTGAGAAAAATGAGTTTCTGTCTCTACAGATGACCTC
AAAGCTGGGGAGGCCACAGAAAGATTCTTGCTCATGAGGTATCCAAAACGGGTAGCTTATATTTAGATCATTGCCACAAGTTCGAGGCATGCAGGCTTGA
AATTTTGTGTCTATGGAAAGTGTGTGTTTGGCTAAAGTGAAGAAGATGAAGAAAACTATGCATATATGAAAAGGTTCTGAGGACTTGAAGAGGTTTTGGA
GGTCCATTTGGGGTTGAAGGAAGCAAGGAGTAAAGGAAAACAGAGGAAGAAGGAAAGCCTTACTGTGTACTGGAAATGGAAGTTGTGTCTATAGTTTACA
ATTTTGTTTTGTTTTGTTTTGGTTTATGAAAGGAAAGCCTTCTCATTAATAAATAAATAAACGGCCTTCAAGTTCGATTTTCTAATAATATACTACGAAA
TCTTCTCTGATCTTTAATGGAAAGAAATTTTAATACTTGTTAATCATTTATCGTGACTGATCTCATACTTACGAACCATAATTGGTAAGATCACAAAAAA
ACATTCAAAGTAGTCTTATATTGACCCAAAGCTGGAATAATGTTCTTAAACGAGGGTGTGGGCTGAATATTATTCCTAGCCATTAATTTCCTCCCTTTGA
ATGTTGACCAGATAAGGCTAGCTGTGAGATATTAAAGGATGATTTGGGGTGTGCCCTTTAGAGTTTCAAATTTCATTATCATCCTTAAAATATAAATTAA
ATAACAAAT