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Detailed information on CNT30514553


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FID6|Y5392_ARATH, E-value = 7e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379990Juglans regiaManihot esculenta16.9664.1184.56259forward

Expression of CNT30514553

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MIYSTLEIEKNEFLSLQMTSKLGRPQKDSCS*

Sequence

>CNT30514553
TGCATCCATAGTTCTTTATCTAGCTCAAGGTGCCTGTATATCCAATGTGGAAAGTATGTTTCACTGGTATGATTAGTCTCAGCATCTATATTATTTGTAC
CCCCAACCATTTCTAAAACCATCATTCCGTAGCTATAAACATCAGACTTATGAGAGACCCCTCCAAAATTTCTACAAAATACTTCTAGAGCTATATATCC
CACAGTCCCTCTTGCACCCAACATTGATATGATACTATTTTCTCTTGGGCATATTTTTGAAAGGCCAAAATCAGAAATCTTTGGACAGAAGTTCGCATCC
AGAAGAATGTTGTGAGACTTAATGTCAAAATGCAAGATTCTTGTGTTACAACCTCTGTGCACATCAACCGAAGACTGGCACGATCTTGAAGAATAGTTTT
GCTCCAGTACTTCCTTGTGGAAAGTGGCGAAAGAATATAGATGGAAACTTTTGCTAGCACACTCTATTTCATATATAGGGTAATCAGGAAATGATGTGCA
GTTGTAGAAGATGGAGAAATCACTATTATCCGAACTAAGATCCAATTGAGTTCGATGGATGCTGATATTGTGCAAAGGAGCAGGGCATGTGTCCTTATAG
GCAGCAGCATTGGCGACTAGCAATGAATAGTTGGCGTAAAAGATATCCTTAATGATATACTCGACATTGGAAATTGAGAAAAATGAGTTTCTGTCTCTAC
AGATGACCTCAAAGCTGGGGAGGCCACAGAAAGATTCTTGCTCATGAGGTATCCAAAACGGGTAGCTTATATTTAGATCATTGCCACAAGTTCGAGGCAT
GCAGGCTTGAAATTTTGTGTCTATGGAAAGTGTGTGTTTGGCTAAAGTGAAGAAGATGAAGAAAACTATGCATATATGAAAAGGTTCTGAGGACTTGAAG
AGGTTTTGGAGGTCCATTTGGGGTTGAAGGAAGCAAGGAGTAAAGGAAAACAGAGGAAGAAGGAAAGCCTTACTGTGTACTGGAAATGGAAGTTGTGTCT
ATAGTTTACAATTTTGTTTTGTTTTGTTTTGGTTTATGAAAGGAAAGCCTTCTCATTAATAAATAAATAAACGGCCTTCAAGTTCGATTTTCTAATAATA
TACTACGAAATCTTCTCTGATCTTTAATGGAAAGAAATTTTAATACTTGTTAATCATTTATCGTGACTGATCTCATACTTACGAACCATAATTGGTAAGA
TCACAAAAAAACATTCAAAGTAGTCTTATATTGACCCAAAGCTGGAATAATGTTCTTAAACGAGGGTGTGGGCTGAATATTATTCCTAGCCATTAATTTC
CTCCCTTTGAATGTTGACCAGATAAGGCTAGCTGTGAGATATTAAAGGATGATTTGGGGTGTGCCCTTTAGAGTTTCAAATTTCATTATCATCCTTAAAA
TATAAATTAAATAACAAATATTACCTCTTACTATCGGCTTTAAACTTTTGGAACAAGTGGTGATATATTCACATGTTATGATCAGAGCATATGATTAGCT
CCTAAGTTCGAATCCTGACTCATCTAC