Detailed information on CNT30514551


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30508071Juglans regiaNicotiana attenuata23.6820.8282.91117forward
CNT30261455Juglans regiaBrassica rapa12.7523.4287.363forward
CNT3029428Juglans regiaTheobroma cacao15.3836.0289.4776forward

Expression of CNT30514551

Peptides detected in this lncRNA

>peptide 1 (55 aa)
HWTLPPLLAMEVISVLSLRVTGKAEADLRPVKGATMAALAGEAIPTFKQAKAKLS*

>peptide 2 (81 aa)
MEVISVLCLRVTGKAEADLRPVKGATMAALAGEALLTEAIAVDEMMEEAIFYVYRPHTALALGTLLKGFCLLIVSTLIEQKP

Sequence

>CNT30514551
CACTGGACTCTTCCACCATTGCTGGCTATGGAGGTAATATCAGTGTTGAGTTTGCGGGTAACAGGGAAGGCCGAGGCTGACTTGAGACCGGTGAAAGGTG
CGACCATGGCAGCTTTAGCCGGAGAGGCCATACCTACATTCAAACAAGCAAAAGCAAAATTGAGCTAAAAGTGTTTTCTTCTGTGTTTCATAGCATATAT
GGAAGTACGTACCTGCATGCACTGAACTCTTCCGCCATTGCTGGCTATGGAGGTAATATCAGTGTTGTGTTTGCGGGTGACAGGGAAGGCCGAGGCCGAC
TTGAGACCGGTGAAAGGTGCGACCATGGCAGCTTTAGCCGGAGAGGCTCTGTTAACCGAGGCAATAGCCGTGGATGAGATGATGGAGGAAGCCATTTTCT
ATGTTTACCGACCACACACAGCTTTGGCTTTGGGAACACTTTTGAAAGGCTTTTGCTTGCTGATTGTTTCGACTCTTATAGAACAGAAACCACT