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Detailed information on CNT30514302


BLAST search results

BLAST vs Swiss-Prot:
sp|Q09020|PR4_PHAVU, E-value = 7e-09

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30524561Juglans regiaSetaria italica22.5911.0787.6129forward
CNT30639598Juglans regiaNymphaea colorata25.9224.7985.81148forward
CNT30533654Juglans regiaEucalyptus grandis24.8728.9885.92142forward
CNT30549812Juglans regiaIpomoea triloba24.5226.2781.43140forward
CNT3084841Juglans regiaVigna radiata25.7427.5385.71147forward
CNT30135597Juglans regiaLolium perenne18.5620.592.45106forward
CNT307034Juglans regiaZea mays22.5916.3589.92129forward
CNT30624138Juglans regiaDaucus carota23.1224.7784.09132forward
CNT30346089Juglans regiaEragrostis tef22.5922.9589.92129forward
CNT30597257Juglans regiaOryza meridionalis23.1226.4590.15132forward
CNT30355824Juglans regiaLactuca sativa22.9416.7983.97131forward
CNT30371492Juglans regiaOryza glumipatula23.1224.5890.15132forward
CNT3053146Juglans regiaAmborella trichopoda25.2222.8684.72144forward
CNT30108688Juglans regiaOryza longistaminata23.1223.5390.15132forward
CNT30104475Juglans regiaOryza rufipogon23.1223.4990.15132forward
CNT30578401Juglans regiaOryza barthii23.1223.6190.15132forward
CNT30118085Juglans regiaOryza nivara23.1224.7290.15132forward

Expression of CNT30514302

Peptides detected in this lncRNA

>peptide 1 (66 aa)
FLEREKEHSQLGRQIESATMIYDVNSPLFRSFLSQKGGSSDKRKMEEQKPKEQKPKANENKPIMTE*

Sequence

>CNT30514302
TTCCTAGAGAGAGAAAAAGAGCATAGCCAGTTAGGGCGACAAATTGAATCGGCGACAATGATCTACGACGTGAACTCTCCCCTCTTCCGATCCTTCCTCA
GCCAGAAGGGCGGCTCCTCTGACAAGAGGAAAATGGAAGAGCAAAAACCAAAGGAGCAGAAACCCAAGGCAAATGAGAATAAGCCTATTATGACAGAGTG
ATATCTGCTTGGGCTATAATGTTCTAAATGGGATAGGGTGGAAGATGTCTTTACTCTAATGATAAGAGTTGATAATTACATGATTAAACCAATGGTCAAG
ACTTTACCTTTGGGTTTGTAATGGTCTCTGTTTGGACGTGTAGCTGTTCCTTTTTTTTAATCTGAGTATGGATGTTCTTGTTCTTGTTCTCCTTTGTCCC
TGATTTTCTTCGGGTTTTTTTCTTTTGTGGAATGATCAAGGACTGGTGATTTACTTAAAAGGATTGAGGCTTTCTTTAGTAGAAAACTGATGGTAGATAC
TAGATGCTGCTTTGGTTCGTTAAGATGCTGAAATTGTCAACAGAAGCAATCACTTAAGGTACAGCCTAGGG