Detailed information on CNT30514280


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373911Juglans regiaArabidopsis thaliana9.4420.7490.3262forward
CNT3084260Juglans regiaVigna radiata10.222.0494.0367reverse complement
CNT30235726Juglans regiaBrassica oleracea9.4420.2690.3262reverse complement
CNT30714975Juglans regiaMalus domestica golden10.523.1588.4169forward
CNT30174902Juglans regiaVigna angularis9.282095.0861reverse complement
CNT30725324Juglans regiaLupinus angustifolius9.7431.8490.6264reverse complement

Expression of CNT30514280

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MPHLLTWSGRDSISHREPDQDGICQRSITLKPPHG*

>peptide 2 (35 aa)
MPAFHHFEAPTWVIGSRCQARRLSLPLCGLIKYGVF

>peptide 3 (48 aa)
MVQPGHIHRIFIGSPEALIRYPSTVRSGGLSLLCETSLTPYPQPLGNT*

Sequence

>CNT30514280
AAGGAGTGTACGTAGAAGAATTGCTGAGAAAAACCGAGAAATAGTTTGAACTTTACCCCCCAACTGGAACAGAGCTGGAGAACAGAGAACTGAGAAGGAG
TGAACAAAAAAAGTGATGGTCCAGCCAGGTCATATCCACCGGATCTTTATTGGGTCACCAGAGGCACTGATCCGTTATCCCTCCACCGTCAGGAGCGGGG
GGTTGTCGCTGCTCTGTGAAACCAGCCTCACGCCTTACCCCCAACCTCTAGGAAACACGTGATCCGAGGGCCTTCGCCCAGATCACATGCCTCATCTCTT
GACTTGGAGCGGGCGGGACAGTCAAATCCACCGGGTCTTTACTGGGGGATCCCAGAGGCACTGATACGTTATCCCTCCACTGTCAGGAGCGGGGGGTTGT
CGCTGCTCTGTGAAACCAGCCTCACGCTTTGCCCCCAACCTCTAGGAATCACGTGACCCGAGGGCCTTCGCCTAGATCACATGCCTCATCTCTTGACTTG
GAGCGGGCGGGACAGTATAAGCCATCGGGAGCCCGACCAGGATGGAATATGCCAGCGTTCCATCACTTTGAAGCCCCCACATGGGTAATAGGCTCGCGTT
GCCAAGCCCGGCGATTATCACTACCTCTTTGTGGTCTTATAAAGTATGGAGTTTTCT