Detailed information on CNT30513856


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30698271Juglans regiaQuercus lobata47.647.381.88149forward
CNT30730253Juglans regiaCorchorus capsularis41.2128.3582.17129forward
CNT3070604Juglans regiaQuercus suber49.8436.3682.69156forward
CNT30629601Juglans regiaVigna unguiculata34.1923.7385.98107forward
CNT3044720Juglans regiaPrunus dulcis33.2315.7883.65104forward
CNT30354871Juglans regiaLactuca sativa30.3529.0586.3295forward
CNT30704968Juglans regiaPrunus avium45.6915.8582.52143forward
CNT3033609Juglans regiaTheobroma cacao35.1416.983.64110forward
CNT3024289Juglans regiaPopulus trichocarpa26.5216.9484.3483forward
CNT30176173Juglans regiaVigna angularis24.625.2589.6177forward
CNT30113887Juglans regiaFicus carica31.9512.4885100forward

Expression of CNT30513856

Peptides detected in this lncRNA

>peptide 1 (31 aa)
VLSVWLLYPITVRTVIYKNNRVAMNSAMMAL*

Sequence

>CNT30513856
GTTTTGTCAGTTTGGCTCTTGTATCCAATTACAGTTAGAACAGTGATATACAAGAACAACAGGGTGGCAATGAACTCAGCAATGATGGCTCTGTAGAAGG
ACCATTGGGTGAGCTCGTCAGCATCAATCAATGGTGCTGGTGGTGGGTCGTGGTAGTCCTTGGCGGAGAAACCACCTTGCCCTCCAACTTCAATGTCCTT
GGCCATAATGATAGATGCTCCTTGTGCTAGCTAGCTAGAGATGAGTTTTGAGTGTGTTTTGTGATCAGGGAGATCAATCAAGAGAGAGTTGTAGACTTGG
CTTGAGGATGGGG