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Detailed information on CNT30513785


BLAST search results

BLAST vs Swiss-Prot:
sp|P46486|PSAF_FLATR, E-value = 9e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641545Juglans regiaNymphaea colorata24.4417.8884.21152forward
CNT30618119Juglans regiaSesamum indicum39.2347.5682.38244forward
CNT30273262Juglans regiaChenopodium quinoa31.1911.7280.93194forward
CNT3019440Juglans regiaCitrullus lanatus42.669.9283.4265forward
CNT30525128Juglans regiaPhaseolus vulgaris40.6858.781.42253forward
CNT30629005Juglans regiaVigna unguiculata28.1430.0282.86175forward
CNT30709011Juglans regiaGlycine max51.2935.1381.19319forward
CNT30562386Juglans regiaActinidia chinensis35.3740.2983.64220forward
CNT3085970Juglans regiaVigna radiata35.8529.7784.3223forward
CNT30313614Juglans regiaCamelina sativa15.2724.4889.4795forward
CNT308929Juglans regiaZea mays15.2731.5684.2195forward
CNT30716553Juglans regiaMalus domestica golden32.3230.5987.06201forward
CNT30623157Juglans regiaDaucus carota34.7321.8282.87216forward
CNT30620828Juglans regiaCajanus cajan29.5884.0284.78184forward
CNT3038681Juglans regiaCucumis melo36.0155.8680.8224forward
CNT30174403Juglans regiaVigna angularis35.8532.0983.86223forward
CNT3040196Juglans regiaMarchantia polymorpha16.0835.0984100forward

Expression of CNT30513785

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MGLERLVGIVRDIFALDFLLLFCLFLLCYLFRELQSERKGV

Sequence

>CNT30513785
GAGGAGACCAAAAAAAATAAAACAAACCTGAGGGAAAAAAACACATAAAAGAGAAGAATTAGACGTCCTTGGCAATAAGATCGCCATTGACGAATTCTCT
GTAGGCAGCTATAGGCCAGCTGAAGCCTCTGAAGGCCAACCTCGAAGCCAACGGCACATCGATGATGATTTCCTTCTGCGTCGGCTTTTTGTCATCCCTT
ATTGCAATCAGGTAGCTCCGGCCAACCCACCCGATCCACCCCGCAATGTACAGGAACAGAAACCCCGGCGTTATGAACTCCCCCCAGTGCCTCTGGTCTC
CGCTCACTATCAAATGAGGAAGCCCGTCCGACCCACACAGCAAACCCGCCTTCCCGTAGTTGTCGAACCTCCTCTTCGCCTGCAGTGACGTGGAAGCGCT
GGAAGTTTTCTCCGGGTTGCTGTTTTGAGAGGCTGAGCTACAGAGTATCATAGACCTCGATCTTGAGGTCAATGGAGACCCCAACTTCGGCTTCAACATG
GGCTTGGAGAGATTGGTGGGAATAGTGAGAGACATTTTTGCTTTAGATTTTCTTCTTCTTTTTTGTCTTTTTCTTCTTTGCTATTTGTTTAGGGAGTTGC
AGAGTGAAAGGAAGGGTGTGTA