Detailed information on CNT3051367


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30270249Cucumis sativusChenopodium quinoa24.92486.2580forward
CNT30608876Cucumis sativusGossypium raimondii27.7316.5785.3989forward
CNT30112612Cucumis sativusFicus carica37.0713.0382.35119forward

Expression of CNT3051367

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MYGKTSLAVDSTLLYVGPYDCCGERIDPHP*

>peptide 2 (33 aa)
MTVVVNGSILTHNREKMEASRIDHTTTMVGVLF*

>peptide 3 (33 aa)
SSMMINFFFTLALLIHYFTHFLSTFIDMYNLNI*

>peptide 4 (29 aa)
IIYDDQLFLYISTFNPLLHSFSFNLYRHV*

Sequence

>CNT3051367
ATCATCTATGATGATCAACTTTTTCTTTACATTAGCACTTTTAATCCATTACTTCACTCATTTTCTTTCAACCTTTATAGACATGTATAACTTAAATATA
TAGAGCAAATTTCCCAAATGTTATTCTCAGCAACATGTATGGTAAAACTAGTCTAGCAGTTGATTCCACACTCCTCTACGTCGGGCCCTATGACTGTTGT
GGTGAACGGATCGATCCTCACCCATAACAGGGAGAAGATGGAAGCAAGTAGAATCGACCACACGACGACGATGGTGGGTGTTCTGTTTTGACGACCCATC
AAACCTTTCAAGAATGGATAG