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Detailed information on CNT30513655


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3073023Juglans regiaQuercus suber5.0325.4791.1868reverse complement
CNT30588296Juglans regiaMusa acuminata4.5128.590.1661forward

Expression of CNT30513655

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MLVISFIKARITGAVGSALAAILSPNAHLRSLKVSA*

>peptide 2 (44 aa)
MSDEREREREARIEGYPPQPLPQLQLEPQPQFPPQQDIFRFQER*

Sequence

>CNT30513655
GCACATGATATGTGAATCAACGACAAATTGTTGACTCGGATGCTCAAGTTTTTCCGATATTTTTTCAGATGAACCGGACAGAGCCTCTAATTCCAGGAAA
ACGAAAATGAACTGCTATTTTTCTGATTTAGACGAAAGGAGTATTCAATTTTTCATTGGATTATAAAAAAACCAACTCTTCCCACATAAATATTCGCCAA
CTAAAGCAGAGATCCCCCAACAAGCATACACGACTTAAGAAAGTTAACAGACACCAAGCAAGCAGCCAAAGCTTCAGGGTAACAGCAAACCTTAGACTAG
TAAGCTTTGCAGAAAGAGAGAGCCATGCTACTTTATTTTTATCAATATCAGTCTTAAAAGGAAACGAAACATAGAGAAAACACAACACGCATACATAGAT
ATGACGACTAAATGCTAGTTATTAGTTTCATAAAGGCAAGGATCACAGGTGCAGTTGGATCCGCACTTGCAGCCATTCTCAGCCCCAACGCCCATCTCAG
ATCCCTCAAAGTGTCTGCGTAATCCAAAATGATGATATAATGAACATCAGTTTGTTATATAAATGATGGAATTATCAGTTTAAACGAGATAATCCTGCTA
TGAAAAACAAGAGGAAGAAAATGAAATAGAACATACGTCTTCTGGGGAGCAACACCAACGATAAGAGTCTCGGTGCTGGTGGTCTCTGTGTAGCTCATGT
CAGGGTACATCTTGCATCTGCACAATCATTATCAAAGGGAAAAAAGAAACCCGTAAATCCATAAATTCGAAGATCTTCAGGAACGAAATGATTACAAAAA
ATCTGGATTTGTTCTCGTAACAGCTTCATCAAATAGTAAGAACTTTGGCAAAATGAAGAAAACAGGAAAAGAACAAAAAAAAAAAAAAACCAAAATCATG
GTTTAGTTCCTCGTGAATATTCCATGCAAGTACCCATCAGATTACTTTAGGACAACTTTTGGTCTAAGCTCCGATCCAAAATAAACCAATAAATTCTTAA
AGACATCTTTCAACCAAGATTTTATCTGAATAAATCTCAAGAAATAGACACTCTTGAGCATGCAAAGTGATTGATTTTCAAACACAACAAAATAAGCACC
AACTTTTTGAGACAAAGTCAGATTATCCTTATCAAGCCTTGAAAAAGATACATGTCAGACGAGAGAGAGAGAGAGAGAGAGGCTCGAATAGAAGGTTACC
CTCCACAGCCGCTGCCGCAGCTGCAGCTAGAACCGCAGCCACAGTTTCCTCCGCAGCAAGACATTTTCCGTTTTCAAGAAAGATGAAAATAAGAACTGAA
GAAGATTAGTGCAATCGAGGGTAAGTATCAAATAATCAACCTCAACGAGTTTC