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Detailed information on CNT30513509


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-151

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30636316Juglans regiaCapsicum annuum79.9530.7886.36638forward
CNT30113839Juglans regiaFicus carica81.8357.4888.36653forward

Expression of CNT30513509

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MPSLSWILALTLSMVSELSTSRVMRRRITLIEL*

>peptide 2 (53 aa)
MPSLSWILAFTLSMVSELSTSRVIVFPVRVLTKICMPPRRRSTRWRVDSFWIL*

>peptide 3 (40 aa)
MVSELSTSRVMVLPVRVFTKICMPPRRRSTRWRVDSFWIL*

Sequence

>CNT30513509
GGCCTTAACCATATAAGGTGATTGTAGCATAACACAAACTTAAAAACATTTAAATTTATTTCTTAAAAACATAAGATTCACGGGAGCTTGGGGCCAATCC
TTCAGAACCCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTTTGAATATTGTAGTCCGCAAGGGTGCGACCATCCTCCAGTTGCTTGCCGGC
AAAAATCAGCCTCTGCTGGTCAGGTGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCCGAGCTCTCCACCTCAAGGGTGATG
GTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGCCACCGCGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTTTGGATATTATAATCGGCGAGGG
TTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAAATAAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGT
GTCCGAGCTCTCCACCTCCAGGGTGATCGTCTTTCCCGTGAGGGTTTTGACGAAAATCTGCATGCCACCACGGAGACGGAGCACGAGATGGAGGGTTGAT
TCCTTCTGGATATTGTAGTCGGCGAGGGTCCTGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCTTCCTTATCCT
GGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGAGGAGAAGAATTACCTTGATCGAGTTATGATTACTTTATGCG