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Detailed information on CNT30513501


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 1e-155

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30321313Juglans regiaAsparagus officinalis81.2850.3485.45660forward

Expression of CNT30513501

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSRVMVLPVRVFTKICMPPRRRSTRWRVDSFWIL*

>peptide 2 (32 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRPFLF

>peptide 3 (53 aa)
MPSLSWILAFTLSMVSELSTSRVIVFPVRVLTKICMPPRRRSTRWRVDSFWIL*

Sequence

>CNT30513501
ACCAAATTTATTTAGATGGCCCCAACAGGGCCTTAACCATATAAGGTGATTGTAGCATAACACAAACTTAAAAACATTTAAATTTATTTCTTAAAAACAT
AAGATTCACGGGAGCTTGGGGCCAATCCTTCAGAACCCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTTTGAATATTGTAGTCCGCAAGGG
TGCGACCATCCTCCAGTTGCTTGCCGGCAAAAATCAGCCTCTGCTGGTCAGGTGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGT
GTCCGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACGAAGATCTGCATGCCACCGCGGAGACGGAGCACCAGGTGGAGGGTGGAC
TCCTTTTGGATATTATAATCGGCGAGGGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAAATAAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCT
GGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGCTCTCCACCTCCAGGGTGATCGTCTTTCCCGTGAGGGTTTTGACGAAAATCTGCATGCCACCACG
GAGACGGAGCACGAGATGGAGGGTTGATTCCTTCTGGATATTGTAGTCGGCGAGGGTCCTGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGC
TGGTCCGGTGGGATGCCTTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGAC
CCTTTTTATTTC