Detailed information on CNT30513456


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 3e-55

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Juglans regiaOryza sativa32.3940.1694.651028forward
CNT30677083Juglans regiaSetaria viridis13.2658.893.11421forward
CNT30524664Juglans regiaSetaria italica28.8666.9194.54916forward
CNT30639555Juglans regiaNymphaea colorata48.4289.9996.291537forward
CNT30536068Juglans regiaEucalyptus grandis61.4456.6295.691950reverse complement
CNT30549212Juglans regiaIpomoea triloba23.9125.1698.02759forward
CNT30500477Juglans regiaCoffea canephora57.1599.6296.471814forward
CNT30616920Juglans regiaSesamum indicum16.3853.2290.38520reverse complement
CNT30269781Juglans regiaChenopodium quinoa74.279.795.542355forward
CNT30730500Juglans regiaCorchorus capsularis37.56100.4297.41192forward
CNT30630109Juglans regiaVigna unguiculata65.1265.5896.322067forward
CNT30196858Juglans regiaPisum sativum52.7790.292.661675forward
CNT30503447Juglans regiaNicotiana attenuata35.8568.0297.11138reverse complement
CNT3044711Juglans regiaPrunus dulcis15.19101.0597.3482reverse complement
CNT30638683Juglans regiaCapsicum annuum16.2399.8192.23515reverse complement
CNT3090649Juglans regiaSolanum tuberosum74.8686.9197.262376forward
CNT30193801Juglans regiaSecale cereale43.698.0294.221384forward
CNT30291213Juglans regiaTriticum aestivum49.3745.11941567forward
CNT30225309Juglans regiaHordeum vulgare28.5875.2790.52907forward
CNT30400299Juglans regiaTriticum turgidum32.3948.294.551028forward
CNT30569398Juglans regiaActinidia chinensis22.6236.7597.91718forward
CNT30588765Juglans regiaMusa acuminata1986.3995.02603reverse complement
CNT30511396Juglans regiaSolanum lycopersicum19.2566.7892.14611forward
CNT30552690Juglans regiaOryza glaberrima23.3148.3392.03740forward
CNT30441975Juglans regiaAegilops tauschii19.4177.2994.97616forward
CNT30248027Juglans regiaAvena sativa29.4996.193.38936reverse complement
CNT30657980Juglans regiaTriticum dicoccoides12.6798.5395.27402reverse complement
CNT30310298Juglans regiaCamelina sativa32.2367.0897.851023reverse complement
CNT3062651Juglans regiaArabidopsis lyrata21.5582.2197.95684reverse complement
CNT30460907Juglans regiaSaccharum spontaneum52.2749.7994.091659forward
CNT30142438Juglans regiaLolium perenne19.3198.0892.5613forward
CNT3017045Juglans regiaZea mays52.2761.5493.431659reverse complement
CNT30655263Juglans regiaRosa chinensis53.1893.5293.541688forward
CNT30206724Juglans regiaHelianthus annuus46.568.0297.491476forward
CNT30713553Juglans regiaMalus domestica golden19.0689.7697.52605forward
CNT30627950Juglans regiaDaucus carota13.4599.396.02427forward
CNT30688464Juglans regiaTriticum urartu57.1298.5394.321813forward
CNT30722943Juglans regiaTriticum spelta49.477.8995.221568forward
CNT30347837Juglans regiaEragrostis tef20.2683.491.29643reverse complement
CNT30620564Juglans regiaCajanus cajan23.7214.5598.27753reverse complement
CNT30596725Juglans regiaOryza meridionalis50.0646.0494.021589forward
CNT30354697Juglans regiaLactuca sativa22.2410098.58706forward
CNT30154922Juglans regiaPrunus persica53.53100.5994.061699reverse complement
CNT30411976Juglans regiaPapaver somniferum47.168.5596.391495forward
CNT30646402Juglans regiaCannabis sativa34.4486.491.861093reverse complement
CNT30319706Juglans regiaAsparagus officinalis73.2580.997.332325forward
CNT3036965Juglans regiaCucumis melo22.8799.7399.17726forward
CNT30332807Juglans regiaDioscorea rotundata44.3985.2996.741409reverse complement
CNT30148090Juglans regiaBrachypodium distachyon44.9949.1694.121428reverse complement
CNT30103033Juglans regiaOryza rufipogon48.7499.7492.441547reverse complement
CNT30585638Juglans regiaEchinochloa crusgalli19.640.1893.89622reverse complement
CNT30604015Juglans regiaOryza punctata15.91104.5591.88505reverse complement
CNT30174498Juglans regiaVigna angularis12.5178.6196.73397forward

Expression of CNT30513456

Peptides detected in this lncRNA

>peptide 1 (71 aa)
MFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFPSTRGPGRTHLWCTSYRAHGKRWVAKCGADNC*

>peptide 2 (68 aa)
MNGAKRSAEAVGCKKASVGERSALGGSTGASSGGRSGSENVGLSNANIGENPMPRKPKGSSARFGHGG*

>peptide 3 (95 aa)
DKILPFSSTLGWHSLKVKGEVQTRKGLRWIPRHPETRKGVVSDEMLRGVENKRRSGDSRIGQTFKLLLNPWAGKRQPGELKHLSSQRKRKQKRFP*

>peptide 4 (95 aa)
MSVKMRATCTWTERPYEASLFPGIGFGPFLRSLGGGRRRPPSGGARAVSEIPLWKSYNSNLVSGPTGQGTVSGRQFLWGVGLPKGNGGVQRQKGA*

>peptide 5 (44 aa)
MGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP*

>peptide 6 (30 aa)
MGSLPLRGWSDRSFENSREGHGETSRLSLR*

>peptide 7 (41 aa)
MTRSIRSGTRHLFSLFNSLTTRKTIVPLFDNMKKPKASALPS

>peptide 8 (59 aa)
MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGREGGTKSRQTLNTRYDLKITGVKVGQ*

>peptide 9 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDGEVVP*

Sequence

>CNT30513456
TGATAAGATCCTTCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAGTTAAGGGCGAGGTTCAAACGAGGAAAGGCTTACGGTGGATACCTAGGCAC
CCAGAGACGAGGAAGGGCGTAGTAAGCGACGAAATGCTTCGGGGAGTTGAAAATAAGCGTAGATCCGGAGATTCCCGAATAGGTCAAACTTTCAAACTGC
TGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGAGAGC
GAAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCGGTGAAGTGCTGCACCCTAGATGGCG
ATAGTCCGGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGC
TAAATACTCCTGGGTGACCGATGGTGAAGTAGTACCGTGAGGGAAGGGTGAAAAGAACCCCATCGGGGAGTGAAACAGAACATGAAACCGTAAGCTCCCA
AGCAGTGGGAGGAGCCCAGCCCGGTGCTCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCCCCGGAG
CCGTAGCGAAAGCGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAG
TGGAGGTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTAGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATG
CGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGGGCGGTACCAAATCGAGGCAAACTCTGAATACTAGA
TATGACCTCAAAATAACAGGGGTCAAGGTCGGCCAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCAGATCACCAGCTAAGGCCC
CTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTT
ATCGAGCGCTCTTGCGCCGAAGATGAACGGGGCTAAGCGATCTGCCGAAGCTGTGGGATGTAAAAAGGCATCGGTAGGGGAGCGTTCCGCCTTAGGGGGA
AGCACCGGCGCGAGCAGCGGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTT
CCTCCGCAAGGTTCGGCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTGAATATTCCTGTACTGCCCCTTG
TTGGTCCCGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGGACGCAAGGTGCCCCTGCTTTTTCAGGGTAAGAAGGGGTAGAGA
AAATACCTCGAACCAATGTTCGAGTACCAGGCGCTACGGCGCTGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACCTTCAACAAAAGGGTA
CCTGTACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGTGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGG
AGAAGGGGTGCCTCCTCACAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAACCCAGGTCTCCGCAAAGTCGTAAGACCATGTATGGG
GGCTGACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGACCTGATGACAGGGGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAA
CGGTCCTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGACTCGGTGAAATAGA
CATGTCTGTGAAGATGCGGGCTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTCACTGTTCCCTGGGATTGGCTTTGGGCCTTTCCTGCGCAGCTTA
GGTGGAGGGCGAAGAAGGCCTCCTTCCGGGGGGGCCCGAGCCGTCAGTGAGATACCACTCTGGAAGAGCTATAATTCTAACCTTGTGTCAGGACCTACGG
GCCAAGGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCC
ACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATAACAGGCT
GATCTTCCCCAAGAGCTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACCTGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCG
CCCATTAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTGTGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAGTA
CGAGAGGACCGGGAAGGACGCACCTCTGGTGTACCAGTTATCGTGCCCACGGTAAACGCTGGGTAGCCAAGTGCGGAGCGGATAACTGCTGAAAGCATCT
AAGTAGTAAGCCCACCCCAAGATGAGTGCTCTCCTATTCCGACTTCCCCAGAGCCTCCGGTAGCACAGCCGAGACAGCGATGGGTTCTCTGCCCCTGCGG
GGATGGAGCGACAGAAGTTTTGAGAATTCAAGAGAAGGTCACGGCGAGACGAGCCGTTTATCATTACGATAGGTGTCAAGTGGAAGTGCGGTGATGTATG
CAGCTGAGGCATCCTAACAGACCGGTAGACTTGAACCTTGTTCCTACATGACCCGATCCATTCGATCAGGCACTCGCCATCTATTTTCATTGTTCAACTC
TTTGACAACACGAAAAACCATTGTTCCACTCTTTGACAACATGAAAAAACCAAAGGCCTCTGCCCTTCCATCCC