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Detailed information on CNT30513431


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-159

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30528694Juglans regiaEucalyptus grandis71.1562.8988.89693forward
CNT30506305Juglans regiaNicotiana attenuata71.1573.4985.14693forward
CNT30169911Juglans regiaPistacia vera70.1236.8285.21683forward
CNT30540607Juglans regiaBrassica napus71.2547.0285.16694forward
CNT3074679Juglans regiaBrassica juncea70.1275.4785.21683forward
CNT30229076Juglans regiaAnanas comosus70.5353.2187.77687forward
CNT30128346Juglans regiaCorymbia citriodora70.3373.7485.84685forward
CNT30623044Juglans regiaDaucus carota70.5334.8486.17687forward
CNT30120599Juglans regiaCitrus clementina69.8268.285.29680forward
CNT30114617Juglans regiaEutrema salsugineum70.1286.5785.36683forward

Expression of CNT30513431

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVIVFPVRVLTKICMPPRRRSTRWRVDSFWIL*

>peptide 2 (58 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICICGKQHHQRRLLDTTTLLSTRFD*

>peptide 3 (50 aa)
MPSLSWILAFTLSMVSELSTSRVIVFPVKVLTKICIPPLSLKTRWRVDSF*

Sequence

>CNT30513431
GAGAATCTACGGCATAAGTATTAGAATATAAAACTGCAAACCAAATTTATTTAGATGGCCCCAACAGGGCCTTAACCATATAAGGTGATTGTAGCATAAC
ACAAACTTAAAAACATTTAAATTTATTTCTTAAAAACATAAGATTCACGGGAGCTTGGGGCCAATCCTTCAGAACCCACCACGGAGACGGAGGACAAGGT
GGAGGGTGGACTCCTTTTGGATATTATAATCGGCGAGGGTTCGGCCGTCCTCCAGCTGCTTGCCGGCGAAAATAAGCCTCTGCTGGTCCGGGGGGATGCC
CTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGAGCTCTCCACCTCCAGGGTGATCGTCTTCCCTGTCAAGGTCTTGACGAAGATTTGC
ATTCCTCCCCTGAGCCTCAAGACGAGGTGGAGGGTCGACTCCTTCTGAATATTGTAGTCGGCAAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAGA
TCAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCGATGGTGTCAGAGCTCTCAACCTCCAAGGTGATCGTCTT
TCCCGTGAGGGTTTTGACGAAAATCTGCATGCCACCACGGAGACGGAGCACGAGATGGAGGGTTGATTCCTTCTGGATATTGTAGTCGGCGAGGGTCCTG
CCGTCTTCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCTTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGG
AGCTCTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAGATTTGCATCTGTGGAAAACAACATCATCAGAGAAGACTTTTAGATACGAC
GACACTGCTGTCTACGAGATTTGATTAGAAAAATTTGTGCATAAATTTTAAATCATGCATAAATTTGTGCATAC