Detailed information on CNT30513357


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673993Juglans regiaSetaria viridis43.8952.0694.5291reverse complement
CNT30538116Juglans regiaBrassica napus29.4116.0998.97195reverse complement
CNT30555411Juglans regiaOryza glaberrima23.6838.9694.9157forward
CNT30658798Juglans regiaTriticum dicoccoides45.799.0294.72303forward
CNT30371139Juglans regiaOryza glumipatula18.5524.8595.93123forward
CNT30150229Juglans regiaBrachypodium distachyon45.740.9595.05303reverse complement
CNT30603109Juglans regiaGaldieria sulphuraria9.223.3791.861forward
CNT3039583Juglans regiaMarchantia polymorpha36.860.2594.26244forward

Expression of CNT30513357

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MFQFARLSLACPWIQQQFESLTYSGISGSTLIFNSPKHFVAYYALPRLWVPRYPP*

>peptide 2 (44 aa)
MRFIFALLIASLFVNKADSELSFIPRHNSYPCASDSPGVRSQKYS

>peptide 3 (40 aa)
MPPAFILSQDRTLHEIHICITYSFLVRKQSGFGIVFHSKA*

Sequence

>CNT30513357
GCGAAATGGGTGATGCACTTCACCGCTTCGCCTAGCAGCACGACGCTTGTATTGCTCTCCCACAACCCCGTTTTCACGGTTTAGGCTGCTCCCATTTCGC
TCTCCGCTACTACGGGAATCGCTTTTGCTTTCTTTTCCTCTGGCTACTAAGATGTTTCAGTTCGCCAGGTTGTCTCTTGCCTGCCCATGGATTCAGCAGC
AGTTTGAAAGTTTGACCTATTCGGGAATCTCCGGATCTACGCTTATTTTCAACTCCCCGAAGCATTTCGTCGCTTACTACGCCCTTCCTCGTCTCTGGGT
GCCTAGGTATCCACCGTAAGCCTTTCCTCCCCCTCCTCAGGCGGATTCCTCCTTTTGCTCCTCAGCCTACGGGGTATTAGCAGCCGTTTCCAGCTGTTGT
TCCCCTCCCAAGGGCAGGTTCTTACGCGTTACGCACCCGTCCGCCACTGGAAACACCACTTCCCGTCCGACTTGCATGTGTTAAGCATGCCGCCAGCGTT
CATCCTGAGCCAGGATCGAACTCTCCATGAGATTCATATTTGCATTACTTATAGCTTCCTTGTTCGTAAACAAAGCGGATTCGGAATTGTCTTTCATTCC
AAGGCATAACTCGTATCCATGCGCTTCAGATTCGCCTGGAGTTCGCTCCCAGAAATATAGCCA