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Detailed information on CNT30513340


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 4e-151

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30630828Juglans regiaVigna unguiculata72.8382.0385.56630forward

Expression of CNT30513340

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVIVFPVRVLTKICMPPRRRSTRWRVDSFWIL*

>peptide 2 (33 aa)
MPSLSWILALTLSMVSELSTSRVMRRRITLIEL*

>peptide 3 (37 aa)
MVSELSTSRVMVLPVRVLTKICIPPLSLKTRWRVDSF*

Sequence

>CNT30513340
GAGAATCTACGGCATAAGTATTAGAATATAAAACTGCAAACCAAATTTATTTAGATGGCCCCAACAGGGCCTTAACCATATAAGGTGATTGTAGCATAAC
ACAAACTTAAAAACATTTAAATTTATTTCTTAAAAACATAAGATTCACGGGAGCTTGGGGCCAATCCTTCAGAACCCACCACGGAGACGGAGGACAAGGT
GAAGGGTAGACTCCTTTTGAATATTGTAGTCCGCAAGGGTGCGACCATCCTCCAGTTGCTTGCCGGCAAAAATCAGCCTCTGCTGGTCAGGTGGGATCCC
CTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCCGAGCTCTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGC
ATTCCTCCCCTGAGCCTCAAGACGAGGTGGAGGGTCGACTCCTTCTGAATATTGTAGTCGGCAAGGGTACGGCCGTCCTCCAGCTGCTTGCCGGCAAAGA
TCAGCCTCTGCTGGTCCGGTGGGATACCCTCCTTGTCCTGGATCTTGGCCTTGACATTATCGATGGTGTCAGAGCTCTCAACCTCCAAGGTGATCGTCTT
TCCCGTGAGGGTTTTGACGAAAATCTGCATGCCACCACGGAGACGGAGCACGAGATGGAGGGTTGATTCCTTCTGGATATTGTAGTCGGCGAGGGTCCTG
CCGTCTTCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCTTCCTTATCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCGG
AGCTCTCCACCTCGAGGGTGATGAGGAGAAGAATTACCTTGATCGAGTTATGATTACTTTATGCG