Detailed information on CNT30513318


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 3e-159

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Juglans regiaNymphaea colorata64.9737.4286.56662forward
CNT30315749Juglans regiaCorylus avellana68.7943.1789.02701forward
CNT30525954Juglans regiaPhaseolus vulgaris66.9362.1785.48682forward
CNT30630785Juglans regiaVigna unguiculata66.6379.686.45679forward
CNT3044343Juglans regiaPrunus dulcis67.3277.7887.17686forward
CNT30635987Juglans regiaCapsicum annuum67.2242.3685.69685forward
CNT30586586Juglans regiaMusa acuminata67.2248.1786.42685forward
CNT3089455Juglans regiaVigna radiata63.9853.6286.04652forward
CNT30171036Juglans regiaTrifolium pratense67.2243.7485.4685forward
CNT3077671Juglans regiaBrassica juncea67.2270.485.26685forward
CNT30229013Juglans regiaAnanas comosus67.0343.3187.85683forward
CNT30652979Juglans regiaRosa chinensis68.1163.3886.6694forward
CNT30364163Juglans regiaSorghum bicolor62.5169.3986.5637forward
CNT30153569Juglans regiaPrunus persica67.5276.2787.06688forward

Expression of CNT30513318

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICI*

>peptide 2 (40 aa)
MVSELSTSRVMVLPVRVFTKICMPPRRRSTRWRVDSFWIL*

>peptide 3 (53 aa)
MPSLSWILAFTLSMVSELSTSRVIVFPVRVLTKICMPPRRRSTRWRVDSFWIL*

Sequence

>CNT30513318
AACCATATAAGGTGATTGTAGCATAACACAAACTTAAAAACATTTAAATTTATTTCTTAAAAACATAAGATTCACGGGAGCTTGGGGCCAATCCTTCAGA
ACCCACCACGGAGACGGAGGACAAGGTGAAGGGTAGACTCCTTTTGAATATTGTAGTCCGCAAGGGTGCGACCATCCTCCAGTTGCTTGCCGGCAAAAAT
CAGCCTCTGCTGGTCAGGTGGGATCCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCCGAGCTCTCCACCTCAAGGGTGATGGTCTTG
CCCGTGAGGGTCTTCACGAAGATCTGCATGCCACCGCGGAGACGGAGCACCAGGTGGAGGGTGGACTCCTTTTGGATATTATAATCGGCGAGGGTTCGGC
CGTCCTCCAGCTGCTTGCCGGCGAAAATAAGCCTCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCCGA
GCTCTCCACCTCCAGGGTGATCGTCTTTCCCGTGAGGGTTTTGACGAAAATCTGCATGCCACCACGGAGACGGAGCACGAGATGGAGGGTTGATTCCTTC
TGGATATTGTAGTCGGCGAGGGTCCTGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAGCCTCTGCTGGTCCGGTGGGATGCCTTCCTTATCCTGGATCT
TGGCCTTAACGTTGTCGATGGTGTCGGAGCTCTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGAGTTTTCACGAAGATTTGCATCTAAAAATTTGTGCA
TAAATTTTAAATCATGCATAAATTTGTGCATACTCTACGAGATCTGATCAGAGAGGCTCAAACCAAAAATTAGATTAAAATTCTTTAGAAATTTCCGCTC
AGATCTGTGGGACATGTAGGATGAAGCAGATCTCAGAGCCGAAACCTTGTAAGTTTTTTAAAATCTCATAAAAATAAGGAAAAGAAATCGATTTGAATCT
CTCCCACACCTCTTCCAAG