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Detailed information on CNT30513081

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT3032745	Juglans regia	Theobroma cacao	11.83	31.98	87.32	71	forward

Expression of CNT30513081

Peptides detected in this lncRNA

>peptide 1 (59 aa)
VRACDYTRNLYVQRLSLLQGAAQASLAMSHQYYVLCSETCLVAKLCQPPQNNENRKCML*

>peptide 2 (52 aa)
MPHIQRHVKGRIGNLLINKRDKNGSTNLSLCRIGYTDDCDDLRKENRNFESS*

>peptide 3 (73 aa)
FGPVTILEIYMYKGSLYFRELLKLLLQCLTNIMCFVQKHVLWQNYVNLHKIMRTESVCSNRINVLDVFIVIPY*

Sequence

>CNT30513081
GTTCGGGCCTGTGACTATACTCGAAATCTATATGTACAAAGGCTCTCTCTACTTCAGGGAGCTGCTCAAGCTTCTCTTGCAATGTCTCACCAATATTATG
TGCTTTGTTCAGAAACATGTCTTGTGGCAAAACTATGTCAACCTCCACAAAATAATGAGAACCGAAAGTGTATGCTCTAACCGTATCAATGTGCTTGATG
TCTTCATTGTGATTCCATATTAGATATGTTAACTTTGCCAAAAATTCAGGTGGTGCTGTTCTTCCGATTAGTGACCATACATTCTCAATCACTGTCCTTG
TCCAAGTAGTCATTGTATACAAAGCAATCTGCATCACAGGTTCAGGAAATCATCATAAATAGACAAAGTTTTGAGTACAAGTAGCAAACCAAAAACCCAT
CCTCATGCCACATATACAGCGCCATGTAAAGGGAAGGATTGGTAATCTACTTATTAACAAAAGAGATAAAAATGGAAGTACAAATCTTTCATTATGCAGA
ATAGGTTACACTGATGATTGTGATGATTTAAGAAAGGAAAATAGAAACTTTGAAAGTAGCTGAACCTCATTATCTACAGTAAAGGAAAAGAAGGAAAGAA