Detailed information on CNT30513072


BLAST search results

BLAST vs Swiss-Prot:
sp|O23755|EF2_BETVU, E-value = 3e-70

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640134Juglans regiaNymphaea colorata67.1540.4185.25278forward
CNT30728649Juglans regiaCorchorus capsularis57.4921.8587.82238forward
CNT30143750Juglans regiaMedicago truncatula77.2941.7886.88320forward
CNT30210789Juglans regiaHelianthus annuus47.3454.1482.65196forward
CNT3024028Juglans regiaPopulus trichocarpa77.2943.386.88320forward

Expression of CNT30513072

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MKSSCKSFKQISRWSSPAPAMMCSPDSSIEQTTIGSDFAKRFSPSTSFGRSDATLH*

>peptide 2 (33 aa)
MQPCIEQPHARQAIQRTSWHGLGVHQLPSHLSK*

Sequence

>CNT30513072
CTCATTTGTCAAAGTAGCATTCTTGGTGATATACTGATCCAACCCAACCAAGGCGACCGTGTTACCGCAAGGCACCACCCATGAAATCATCCTGCAAATC
CTTCAAACAGATCTCAAGGTGGAGTTCTCCAGCACCAGCTATGATGTGCTCTCCAGACTCTTCAATAGAACAGACAACCATAGGATCTGACTTTGCCAAA
CGTTTCAGTCCTTCAACAAGCTTCGGAAGGTCAGATGCAACCTTGCATTGAACAGCCACACGCACGACAGGCGATACAGAGAACTTCATGGCACGGATTG
GGTGTGCATCAACTTCCTTCTCATTTGTCAAAGTAGCATTCTTGGTGATATACTGATCCAACCCAACCAAGGCGACCGTGTTACCGCAAGGCACGTCCTC
TACTGTTTCCTGCT