Detailed information on CNT30512995


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30729401Juglans regiaCorchorus capsularis27.5417.4586.88160forward
CNT30381087Juglans regiaManihot esculenta29.623.3487.21172forward
CNT30489557Juglans regiaOlea europaea18.7621.6789.91109reverse complement
CNT30561835Juglans regiaActinidia chinensis23.0615.2489.55134forward
CNT30608750Juglans regiaGossypium raimondii28.0663.6788.34163forward
CNT3035780Juglans regiaCucumis melo20.4822.8482.35119forward

Expression of CNT30512995

Peptides detected in this lncRNA

>peptide 1 (30 aa)
LNATLVEAIAAATPSAASNIFRLLFLQQRR*

>peptide 2 (38 aa)
MQHLLRQLRPQPPPRRATSSVSSFCNNDDKLLPIALIN*

Sequence

>CNT30512995
CCTTGAATGCAACACTTGTTGAGGCAATTGCGGCCGCAACCCCCTCCGCGGCGAGCAACATCTTCCGTCTCCTCTTTCTGCAACAACGACGATAAACTTT
TGCCAATCGCTCTGATTAACTAAAAATTGTAGGCTAGCTTAATAGCTTTTAAATGTAAAGACGACTGAAGACCTAAAACTAATATAGCACTAATTAGTAG
GACAAAGAGGAAGCAAAACCACCACCAGCGAGGAAGAGGAGGTCGGAAGGACTGCCGCCTTCGGAAGGCAAAGCGCCACGCCCGCCGTGCGGCGAAGGGT
TGCTCTCAATTACACAACCCTTGCGTCCGACAGCACGGACATGAAGTAGGGGCCGAGAAACTCCGAATATAGCCGTGATGTCTACAACGCGTCGCTCCTG
GGTTTTACCCCCTACAATCTAAACCAAACTTTCCTTTTTCTTTTTTCCTTGTCTCTAACCCAGACCGAAACCACCGTAATTTTTGAAGAAACGGCACCAC
AAGAAAGGATTTCTTCGCTTTATCGTATTGAGTAATACGATATGCGGAATGTAAGATGAAGAAGGGATAGGAGGCTCTCGG