Detailed information on CNT30512951


BLAST search results

BLAST vs Swiss-Prot:
sp|O23755|EF2_BETVU, E-value = 3e-131

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532226Juglans regiaEucalyptus grandis43.8547.386.55342forward
CNT30316236Juglans regiaCorylus avellana30.2651.4291.95236forward
CNT30547527Juglans regiaIpomoea triloba35.6464.286.33278forward
CNT3019597Juglans regiaCitrullus lanatus51.0353.2184.92398forward
CNT3045373Juglans regiaPrunus dulcis73.4673.0986.91573forward
CNT3085191Juglans regiaVigna radiata36.2839.4784.45283forward
CNT30345702Juglans regiaEragrostis tef69.166.7180.89539forward
CNT30361520Juglans regiaSorghum bicolor40.1345.7681.47313forward
CNT30359537Juglans regiaLactuca sativa40.7748.2580.19318forward
CNT30153558Juglans regiaPrunus persica26.0360.0688.18203forward
CNT30100260Juglans regiaOryza rufipogon52.6957.2482.24411forward
CNT3050899Juglans regiaCucumis sativus21.7967.4682.94170forward

Expression of CNT30512951

Peptides detected in this lncRNA

>peptide 1 (34 aa)
NCSITRHSKKHNKKAIKIQWDSPKNVERKNLTGI*

>peptide 2 (60 aa)
MPTFLVKNTVDTTKCLFRSLYFHQVHRFKKPGFGSQLGSIYNPPGSWNDLTTTSVDGIGM*

>peptide 3 (30 aa)
MASECRTTSQTSKQIPLMFSSANAPSLEAH*

>peptide 4 (31 aa)
MSKEKTSQEYKNADKANSYLYFAQRSHITYL*

>peptide 5 (31 aa)
MTSYPSDRRHIGGKPALRLQPSTYLRIRKIQ*

Sequence

>CNT30512951
AAATTGTTCGATAACCAGACATAGCAAAAAACATAACAAAAAGGCGATCAAAATCCAATGGGATTCACCTAAAAATGTCGAAAGAAAAAACCTCACAGGA
ATATAAAAATGCTGACAAGGCCAACAGTTATCTCTACTTTGCTCAACGATCTCACATAACGTATTTATAGCTTGTCTTCGAACTCCGAAAGTGGGGTCAT
CTGCTCCTTCAAGCCCTTCCTCTTGCGAATATCTGTCACAAGCACCGCTGCCTGTGATCCAGATTCCAAGGGATCAGATGACATCATATCCCAGTGATCG
AAGACACATTGGGGGAAAGCCTGCCCTGAGGTTGCAGCCCTCAACGTACTTGAGAATCCGAAAGATTCAATGACAGGCAGGTATGCCTTGATGTTGTAAA
GAGGGGTACCAGGCCTCTGGATTTCCTCAAACACATGCCCACGTTTCTGGTTAAGAACACTGTAGATACCACCAAGTGCCTGTTCAGGAGCTTGTATTTC
CACCAAGTACACAGGTTCAAGAAGCCTGGGTTTGGCAGTCAGCTGGGAAGCATATATAACCCTCCTGGCAGTTGGAATGACCTGACCACCACCTCTGTGG
ATGGCATCGGAATGTAGAACCACATCACAGACTTCAAAGCAGATACCTCTCATGTTTTCTTCAGCCAATGCACCTTCCTTAGAAGCCCACTGAAACCCGG
CCACAACAGAATCCTTAATTTCATTCAGGTACTGAACTCCCTTACACATATCCACTACCATATTAGGGCCAGTAGTCTCC