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Detailed information on CNT30512879


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379426Juglans regiaManihot esculenta84.2969.9584.07810forward
CNT3096888Juglans regiaSolanum tuberosum81.6978.6683.57785forward
CNT3086449Juglans regiaVigna radiata81.7950.0382.57786forward
CNT3028051Juglans regiaTheobroma cacao81.3764.1584.27782forward
CNT30120117Juglans regiaCitrus clementina66.3993.9684.33638forward

Expression of CNT30512879

Peptides detected in this lncRNA

>peptide 1 (50 aa)
MPSLSCIFALTLSIVSELSTSRVMVLPVKVLTKICIPPRSRSTKCKVDSF*

>peptide 2 (61 aa)
AHIKTSSEHIYEPLKNGKETKGRSTKTIKNTSKLKARDTRLHHRTTTRLNNHHGGEEQGAK*

Sequence

>CNT30512879
GCGCACATTAAAACCAGTTCAGAACATATTTATGAGCCATTAAAAAATGGCAAGGAAACAAAGGGCAGATCTACAAAAACCATAAAGAACACCAGCAAAT
TGAAGGCCCGTGACACTAGACTTCACCATAGAACCACCACCCGGCTCAATAACCACCACGGAGGCGAAGAACAAGGTGCAAAGTAGACTCCTTTTGGATG
TTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTGTTTCCCCGCGAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTGTCCTGAATCTTTGCTT
TCACATTATCAATCGTGTCAGAACTCTCTACCTCCAAGGTAATGGTCTTCCCAGTCAATGTCTTCACAAATATCTGCATCCCACCACGCAAGCGCAGCAC
CAGATGTAGGGTAGATTCCTTCTGAATATTGTAATCTGCAAGAGTCCTCCCATCTTCTAGCTGCTTGCCTGCAAAGATAAGCCTTTGCTGGTCTGGAGGG
ATGCCCTCTTTGTCCTGTATCTTTGCCTTGACATTGTCGATTGTATCCGAACTTTCAACCTCGAGAGTTATGGTTTTACCAGTCAAAGTCTTAACGAAAA
TCTGCATTCCACCACGCAGCCGAAGCACCAAGTGCAAGGTGGACTCCTTCTGAATGTTATAGTCAGCAAGAGTCCTTCCATCTTCTAGTTGCTTCCCAGC
AAAAATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGAATCTTTGCCTTCACATTGTCTATAGTATCCGAGCTTTCAACTTCCAAGGTTATA
GTTTTTCCTGTCAGCGTCTTCACAAAAATTTGCATTCCACCTCGGAGACGGAGCACCAAGTGGAGGGTTGATTCCTTTTGGATATTATAGTCGGCAAGTG
TCCGACCGTCTTCAAGTTGCTTGCCAGCAAAGATCAACCTCTGTTGGTCTGGTGGGATACC