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Detailed information on CNT30512802


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-135

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3069553Juglans regiaQuercus suber79.5480.6486.11583forward
CNT30652074Juglans regiaRosa chinensis79.5484.3784.05583forward

Expression of CNT30512802

Peptides detected in this lncRNA

>peptide 1 (61 aa)
AHIKTSSEHIYEPLKNGKETKGRSTKTIKNTSKLKARDTRLHHRTTTRLNNHHGGEEQGAK*

Sequence

>CNT30512802
GCGCACATTAAAACCAGTTCAGAACATATTTATGAGCCATTAAAAAATGGCAAGGAAACAAAGGGCAGATCTACAAAAACCATAAAGAACACCAGCAAAT
TGAAGGCCCGTGACACTAGACTTCACCATAGAACCACCACCCGGCTCAATAACCACCACGGAGGCGAAGAACAAGGTGCAAAGTAGACTCCTTTTGGATG
TTGTAATCCGCCAGAGTCCTCCCATCTTCAAGCTGTTTCCCCGCGAAGATAAGCCTCTGCTGATCCGGAGGGATTCCTTCCTTGTCCTGAATCTTTGCTT
TCACATTATCAATCGTGTCAGAACTCTCTACCTCCAAGGTAATGGTCTTCCCAGTCAATGTCTTAACGAAAATCTGCATTCCACCACGCAGCCGAAGCAC
CAAGTGCAAGGTGGACTCCTTCTGAATGTTATAGTCAGCAAGAGTCCTTCCATCTTCTAGTTGCTTCCCAGCAAAAATCAACCTCTGCTGGTCTGGTGGG
ATTCCCTCCTTGTCCTGAATCTTTGCCTTCACATTGTCTATAGTATCCGAGCTTTCAACTTCCAAGGTTATAGTTTTTCCTGTCAGCGTCTTCACAAAAA
TTTGCATTCCACCTCGGAGACGGAGCACCAAGTGGAGGGTTGATTCCTTTTGGATATTATAGTCGGCAAGTGTCCGACCGTCTTCAAGTTGCTTGCCAGC
AAAGATCAACCTCTGTTGGTCTGGTGGGATACC