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Detailed information on CNT30512774


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ASR1|EF2_ARATH, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30674978Juglans regiaSetaria viridis17.4729.383.03218forward
CNT30640184Juglans regiaNymphaea colorata31.1751.3981.75389forward
CNT30547471Juglans regiaIpomoea triloba21.8850.4684.98273forward
CNT3019595Juglans regiaCitrullus lanatus38.787.0383.02483forward
CNT3071371Juglans regiaQuercus suber23.32101.3986.6291forward
CNT30405832Juglans regiaBeta vulgaris34.9454.3682.11436forward
CNT30636551Juglans regiaCapsicum annuum33.8163.9484.36422forward
CNT30192963Juglans regiaSecale cereale20.9949.0684.35262forward
CNT30224330Juglans regiaHordeum vulgare37.7497.5283.44471forward
CNT30543621Juglans regiaBrassica napus12.4260.5587.74155forward
CNT30510528Juglans regiaSolanum lycopersicum76.2873.9183.4952forward
CNT30441049Juglans regiaAegilops tauschii28.1292.8686.04351forward
CNT30665536Juglans regiaTriticum dicoccoides43.6782.781.65545forward
CNT30309902Juglans regiaCamelina sativa60.7466.8482.85758forward
CNT30263415Juglans regiaBrassica rapa56.7394.9183.62708forward
CNT30612239Juglans regiaArabis alpina73.1634.7782.37913forward
CNT30448454Juglans regiaSaccharum spontaneum76.2851.6381.51952forward
CNT301916Juglans regiaZea mays32.0598.2881400forward
CNT30212259Juglans regiaHelianthus annuus2546.7881.73312forward
CNT30716232Juglans regiaMalus domestica golden76.2871.7984.98952forward
CNT30479087Juglans regiaArabidopsis halleri15.5466.6785.05194forward
CNT30361828Juglans regiaSorghum bicolor32.8579.1583.17410forward
CNT30370118Juglans regiaOryza glumipatula22.8446.1283.86285forward
CNT30705326Juglans regiaPrunus avium67.2365.2986.53839forward
CNT3054398Juglans regiaAmborella trichopoda34.1362.179.11426forward
CNT30119815Juglans regiaCitrus clementina29.6580.6188.38370forward
CNT30557952Juglans regiaPanicum hallii31.4148.182.4392forward

Expression of CNT30512774

Peptides detected in this lncRNA

>peptide 1 (89 aa)
LLGDLLITVREDFSRTVSRKDTTGSDLIISAPPMKSSCKSFKQISRWSSPAPAMMCSPDSSIEQTTMGSDFAKRFSPSTSFGRSDATLH*

>peptide 2 (33 aa)
MILTFSPVETLPANTRPKAKNLPLSDAGIIFDT*

>peptide 3 (49 aa)
MQPCIEQPHARQATVLPQGTSSTVSCFFPIQITVLCTLLTYKSFFSPGT*

>peptide 4 (32 aa)
MTRFINAFPIKSFSSDFMVTPSFCNIGHSLSF*

Sequence

>CNT30512774
CTTGTTGGGTGACTTGCTCATCACAGTACGGGAAGACTTCTCAAGGACTGTCTCACGGAAGGATACGACAGGATCAGACTTGATAATCTCTGCACCACCC
ATGAAATCATCCTGCAAATCCTTCAAACAGATCTCAAGGTGGAGTTCTCCAGCACCAGCTATGATGTGCTCTCCGGACTCTTCAATAGAACAGACGACCA
TGGGATCCGACTTTGCCAAACGTTTCAGTCCTTCAACAAGCTTCGGAAGGTCAGATGCAACCTTGCATTGAACAGCCACACGCACGACAGGCGACCGTGT
TACCGCAAGGCACATCCTCTACTGTTTCCTGCTTCTTCCCCATCCAGATAACAGTTCTCTGCACACTCTTAACATACAAGTCCTTCTTTTCCCCGGGCAC
ATAGTTGGGACCCATGATTCTAACTTTCAGCCCAGTCGAGACCTTACCAGCAAACACCCGACCAAAGGCAAAGAACCTACCCTTATCAGATGCAGGAATC
ATTTTTGATACATAGAGCATTAGAGGGCCCTCGGGATCACAGTTTCTGATGGCATTAGCATAAATATCATCCAGGGGACCCTCATACAAGTTCTCAACAC
GATACTTTTGGGCCGTGCCAGGAGACGGAAGGTGAAATATCATCATTTCCAACAGGGCACTACTAGCTGGCAGCCAGGTCTGCATGACACGTTTCATCAA
TGCCTTTCCCATTAAATCCTTCTCCTCTGACTTCATGGTGACACCAAGCTTCTGCAACATTGGCCACAGCTTGTCCTTCTGATCATTCATGCAAATGTTG
ATTATCTGCTTGATAGGTTCATAGCAGAACTGAACAAAACCACGCTTGCAGGTAGGAGACCCAGTGTTCTTGCTGGTCCATTTCTTTGTAGCTGGGTCAA
AGAAGTTTTCACCCCAGAGCCGTTCCATCATCTTGCCCTCATCCACTCCAAATTTGGAGGCATACATCTTGGCAAAATTGGTCAGAGTAAAAGCCCAACC
GTGCAAACCAGCGGAGAAGGCAACTGTCCCCTTCTCGGGATAAACCTGAACATCACCCAAGAGGGGATCTTCGTATGTAGCCATGATGACATTTGCATTC
TCAATAACCCTCTGGAATGTTTGGTAAGCCTCCTCACCATCAACCTGGAGCTCAAGGAAACACCTGTCCATTTTGTTAACAGTCAAGACAGGCCTAATCC
TTTCTCCCAAGGCCTGTCGGAGTACAGTTTCTGTTTGGACACAAACAC