Detailed information on CNT30512691


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672571Juglans regiaSetaria viridis10.7841.6784175forward
CNT30592159Juglans regiaMusa acuminata6.7733.9585.45110forward
CNT30440426Juglans regiaAegilops tauschii7.7626.8782.54126forward
CNT30652852Juglans regiaRosa chinensis6.2225.3890.1101forward
CNT30624277Juglans regiaDaucus carota13.3645.5982.03217forward
CNT30367313Juglans regiaSorghum bicolor10.7830.8182.86175forward
CNT30646445Juglans regiaCannabis sativa4.9923.4883.9581forward
CNT3024196Juglans regiaPopulus trichocarpa6.2222.2587.13101forward
CNT30151099Juglans regiaBrachypodium distachyon10.9646.3585.96178forward
CNT30725946Juglans regiaLupinus angustifolius11.8291.4386.46192forward

Expression of CNT30512691

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MSSPSTSNLTNHCSAATWNDFLGTIWEFDPVRT*

>peptide 2 (34 aa)
MYQRFCQSNQPWTAKRISSSSKYAKLPGYKMHAR*

>peptide 3 (40 aa)
MCITPESTRMIDMLVVTSSMRMLDWVHCHTTYLGPAVSPL*

>peptide 4 (58 aa)
MVPRLLHFPTIDSVTSPCIQFQRGLKTFEICSVHRTSPYKCLKPKWPKFQTVCEKQKE*

>peptide 5 (54 aa)
MNEVRSNLSRIEEISKVSRRSHIDQSRGKTFCSMAKNNRARPHRPISSATDKLH*

>peptide 6 (62 aa)
MTVFGHLNKLEECYEYMRLELCTYGSKTPSLSHNRFSYKSVHSISKRIKNIRNLLSTPNITL*

Sequence

>CNT30512691
GGTGTGTTGAATGAATGAAGTGCGGAGTAACCTTTCAAGAATCGAAGAGATCTCGAAGGTATCGAGGAGAAGCCACATAGACCAATCGCGCGGAAAGACG
TTTTGTTCTATGGCTAAGAACAACCGAGCGAGGCCACATAGACCAATCAGTAGTGCTACGGACAAACTACATTGACGTGGCAAAATGCAACGTCAGCAAT
TATATTAAAGGAAAAACAAAAATAGAAGAAGAATGAACAATTAAGCGGGAAGAGTGAAAACACAGCCCAATTCATTTTCAAGCGAAAGGGGAAAACGGCA
GGTGCAATTCGCGGTTGGGCTCTTTGTTAGTTGCTAGTGAAGGTCTTGGTGCGATTCAAGCCGAAAGAGATCAAGGTCTGGTTCTAGAACTTAAGGGCTT
GCTCTTTATATTTACTACAGTCGAATCTGATAAGACTATAGTAGCTTCAGTGCGGATGTGCATCACACCTGAAAGTACTCGTATGATCGATATGCTGGTG
GTTACCTCCTCCATGAGGATGCTCGACTGGGTTCATTGCCACACCACGTACCTTGGGCCAGCAGTTTCTCCACTCTGAACTTGTGGTATGCATTACCAGT
CTTGAGAAGTGACTTCTCATGAGTTCTCCCTCCACCAGCAACCTGACCAATCATTGCTCGGCAGCCACTTGGAACGATTTTCTTGGCACCATATGGGAGT
TTGACCCTGTTAGAACGTAGAAACAGACAAGCTTATGACCTCAGGCTCCTGGCTTAAGATTGTGAAATATCAAAAAGCTTTTTCTTAATATGTAATTGTA
TTTTATTGCATGGGATATTAAATACATAAAGCTTTGGTGCCATCCAAAAAATTGTAATGTATGTACCAAAGGTTTTGTCAGAGTAATCAACCTTGGACTG
CAAAAAGAATATCTTCAAGCAGTAAGTATGCAAAGTTACCAGGATATAAAATGCATGCACGTTAATAGCTACTAGAGAAGTATCGCATGCAATGTTTATG
CTGCAATAAAAAAACTCGACAGAATTTGAGAAAAAATATACATTGAAGTCAAAGAACCCAAGATATAAAATGCTTCATCACAGTTTGAAAAATGACAGTA
TTTGGCCATCTGAACAAGCTGGAGGAATGTTATGAATATATGAGATTGGAGCTGTGCACCTATGGTTCCAAGACTCCTTCACTTTCCCACAATCGATTCA
GTTACAAGTCCGTGCATTCAATTTCAAAGAGGATTAAAAACATTCGAAATTTGCTCAGTACACCGAACATCACCTTATAAATGCCTAAAACCCAAGTGGC
CAAAGTTTCAAACTGTGTGTGAGAAGCAAAAGGAGTAAGCACTAATCATACAGCTAGTTAACACCGAGTAGGCAATTTTTACATTAGAATAGCTACATAA
CTGCCTAAAAGAAGGAATATATACACATTATGTATCGTTTTCAATGGCGCTTAAATCGAACAGCACTATCATCAAAATTCATGTGAATCAAAAGGTAAAG
AATATACTTAAAGTAATCAACTAAAAAACAACAAACCATAACAATTAATTAACATATTCTATTTTACAAGTGATAAATTAATCCACATATCACACAACTA
TAAACTATAACCCGCGGATCCCAC