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Detailed information on CNT3051266


BLAST search results

BLAST vs Swiss-Prot:
sp|Q71T45|H32_EUPES, E-value = 1e-76

BLAST vs NONCODE:
NONBRAT001321, E-value = 9e-43

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30521250Cucumis sativusSetaria italica24.2748.7981.32182forward
CNT30547549Cucumis sativusIpomoea triloba54.9353.2381.55412forward
CNT30700039Cucumis sativusQuercus lobata43.8767.2880.85329forward
CNT30267640Cucumis sativusChenopodium quinoa50.452.0782.8378forward
CNT3069241Cucumis sativusQuercus suber49.3384.0980.54370forward
CNT30380641Cucumis sativusManihot esculenta55.7360.4979.43418forward
CNT30200244Cucumis sativusPisum sativum50.2780.3881.43377forward
CNT30709007Cucumis sativusGlycine max23.0772.6981.5173forward
CNT3048083Cucumis sativusPrunus dulcis50.453.8582.01378forward
CNT3093080Cucumis sativusSolanum tuberosum2830.9782.86210forward
CNT30177168Cucumis sativusSecale cereale24.2724.582.42182forward
CNT30283676Cucumis sativusTriticum aestivum24.2728.2282.97182forward
CNT30398097Cucumis sativusTriticum turgidum24.423.9280.87183forward
CNT30565750Cucumis sativusActinidia chinensis4631.3979.13345forward
CNT3084175Cucumis sativusVigna radiata50.436.2879.89378forward
CNT30508643Cucumis sativusSolanum lycopersicum54.853.4579.56411forward
CNT30441386Cucumis sativusAegilops tauschii19.8731.0481.21149forward
CNT30255091Cucumis sativusAvena sativa24.2728.2682.97182forward
CNT30657055Cucumis sativusTriticum dicoccoides24.2734.882.42182forward
CNT30309861Cucumis sativusCamelina sativa24.6729.8483.78185forward
CNT30259840Cucumis sativusBrassica rapa25.666.4485.42192forward
CNT30613891Cucumis sativusArabis alpina23.8744.4287.71179forward
CNT30141394Cucumis sativusLolium perenne24.2728.3980.77182forward
CNT30609694Cucumis sativusGossypium raimondii53.0751.9680.4398forward
CNT30719851Cucumis sativusTriticum spelta24.2725.3582.42182forward
CNT30477972Cucumis sativusArabidopsis halleri46.1310083.53346forward
CNT30368649Cucumis sativusSorghum bicolor32.6758.3379.59245forward
CNT30358481Cucumis sativusLactuca sativa5040.9481.6375forward
CNT30414942Cucumis sativusPapaver somniferum50.5346.6281.79379forward
CNT30644610Cucumis sativusCannabis sativa49.8781.382.09374forward
CNT3053477Cucumis sativusAmborella trichopoda52.6763.179.49395forward
CNT3022780Cucumis sativusPopulus trichocarpa10.832.7986.4281forward
CNT30585391Cucumis sativusEchinochloa crusgalli4046.0879.33300forward

Expression of CNT3051266

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MNRTKIRVFEQTNQVGLRGLLKCRHGTALKPQIGLEILSNFANQTLKRKFPDQKLSALLVLPDFTKCDGSRTEAMWLLHSTGSRS*

Sequence

>CNT3051266
TTCCTGCTTTGATATGTTTCTTGTTTAGATAACAAAATTAAACTTAATCCAAGAATCTAAATAATCTGCACTTCTTCCAATCAATCTTCATTTTATAGAA
TGTAAATAAGGCATTCAACAAGGATATACGAACAAAAAAAGATCCAATTCCAAAACGGTGATTCATTCCGTAAGCAGATTCAAGATTCACATATACATCC
AACCTGAAGCAATCTAAAGCCCTAGACACCAAATGAACTCAAAAAATATTTTTAAAAAATTAATCCACAACTTTAAGCCCTTTCCCCTCTAATCCTTCTA
GCCAATTGAATATCCTTAGGCATAATCGTAACTCTCTTGGCATGAATCGCACAAAGATTCGTGTCTTCGAACAAACCAACCAAGTAGGCCTCCGCGGCCT
CCTGAAGTGCCGCCACGGCACTGCTCTGAAACCTCAGATCGGTCTTGAAATCCTGAGCAATTTCGCGAACCAAACGTTGAAACGGAAGTTTCCGGATCAA
AAGCTCAGTGCTCTTCTGGTACTTCCTGATTTCACGAAGTGCGACGGTTCCAGGACGGAAGCGATGTGGCTTCTTCACTCCACCGGTAGCCGGAGCTGAC
TTCCTGGCTGCTTTGGTGGCGAGTTGCTTCCTCGGAGCCTTGCCTCCGGTAGATTTTCTGGCTGTCTGCTTGGTGCGAGCCATTCGGGGAAATTGATTTG
ACGAAAGTTGAAGAATTTGGAAGGTTGAACTGAGATTTTGGTTGTGATGA