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Detailed information on CNT30512572


BLAST search results

BLAST vs Swiss-Prot:
sp|P31853|ATPF2_SPIOL, E-value = 4e-73

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30703592Juglans regiaQuercus lobata36.1465.3182.99288forward
CNT30617718Juglans regiaSesamum indicum48.8128.4483.55389forward
CNT30381141Juglans regiaManihot esculenta32.6249.7183.08260forward
CNT30635730Juglans regiaCapsicum annuum32.2537.0978.99257forward
CNT30172703Juglans regiaTrifolium pratense23.2135.7879.46185forward
CNT30653577Juglans regiaRosa chinensis32.2548.7782.88257forward
CNT30120137Juglans regiaCitrus clementina31.8728.879.92254forward
CNT3037313Juglans regiaCucumis melo27.2349.2181.57217forward
CNT30725668Juglans regiaLupinus angustifolius35.7634.8879.65285forward

Expression of CNT30512572

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MTAAACSSSCFTSPDVSFTLFSFSLMAASLSSMNFPRGEK*

>peptide 2 (82 aa)
MMGRVRLKSKRAAFSISTAREGGARAREVAATRERDLRVEEERVKNLEGLIVRLGSGSWGMESLGLVGLEEDMSMLAMAAAC*

Sequence

>CNT30512572
CACTAATCCAACCTCCTTTCCTGGGTTTTCCATAATTGCCAAAATTAGGCAGTGGGAAGGACCTTATTTACGATATCCCGACTGAGAGCAGCAATCTGGG
AATCAAGGGCCTTCAGGGTCTCTTCCTTCTGCAGCTCCAAACTGACCAAAGCCTCCTGCAATTCCGCCTCCACTTTCTTCCTGCCCTCGGCCAGCTTCTG
CTCCACCTCTGCCTGCGTCTCCTTCTTCATCTTGTTGAGGGCTGCCGATATCTCGGCCCTGGCGGCCTTCATGACGGCCGCGGCTTGCTCCTCCAGCTGC
TTCACCTCTCCCGATGTGTCCTTCACGCTGTTCAGCTTCTCTCTAATGGCTGCGTCTCTGTCATCCATGAATTTTCCCAGAGGAGAGAAGTAGAGCTTGT
CGAGGGCGAACTGTAGGAACAAGAACTCGGCCACGATGATGGGGAGGGTGAGGTTGAAGTCGAAGAGAGCGGCCTTTTCAATCTCGACGGCAAGGGAGGG
AGGGGCAAGGGCGAGGGAGGTGGCGGCCACGAGGGAGAGGGATTTGAGAGTGGAGGAGGAGAGGGTGAAGAATTTGGAGGGCTTGATTGTGAGGTTGGGA
AGTGGGAGTTGGGGAATGGAGAGTTTGGGTTTGGTGGGTTTGGAGGAGGACATGAGCATGTTGGCCATGGCTGCTGCTTGCTGACAGTGGTAGTGAATGT
CTGTCAATGGAGTTTTGCTGTGTTTGGAGGATGTGTGTGAGAATCAGATATTGGTTGTGAGAGATTGAGACTGGGAACGGCTATATCTCATTCTTCG