Detailed information on CNT3051215


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LTC5|ERF98_ARATH, E-value = 5e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515949Cucumis sativusJuglans regia27.148.9883.03165forward
CNT30279406Cucumis sativusChenopodium quinoa20.5611.2980.8125forward
CNT30525755Cucumis sativusPhaseolus vulgaris24.5121.3281.21149forward
CNT30564047Cucumis sativusActinidia chinensis20.7222.0780.95126forward
CNT30590385Cucumis sativusMusa acuminata20.7213.9282.54126forward
CNT30234912Cucumis sativusBrassica oleracea19.0824.9581.03116forward
CNT30621468Cucumis sativusCajanus cajan24.516.8884.56149forward
CNT30572283Cucumis sativusVitis vinifera25.9933.4782.91158forward
CNT3022992Cucumis sativusPopulus trichocarpa25.4924.7281.29155forward
CNT30100016Cucumis sativusOryza rufipogon24.0113.9381.51146forward

Expression of CNT3051215

Peptides detected in this lncRNA

>peptide 1 (38 aa)
RISFAGRKSTKDDEFVSVWIPPVNLDVKSTVAGSNRIG*

>peptide 2 (31 aa)
MEKFFQRRSFGRSPERGFSHGWRRKRSRGCW*

Sequence

>CNT3051215
CAGAATTTCCTTCGCCGGTCGGAAGTCAACCAAGGACGATGAGTTCGTATCGGTCTGGATCCCGCCGGTGAACCTCGACGTCAAATCCACCGTAGCCGGA
TCGAACCGTATAGGATAACCATGAGCTACGAATTCTGCTCTACCATAAACGTCCGTGAACAAAAGCGGACGAACGGTGCCGCCCCCATGTAAAAACTGAG
GTTGAATGAATGGAAAAGTTCTTCCAACGCCGTAGCTTCGGGCGATCTCCGGAGAGGGGGTTTTCTCATGGGTGGAGGAGGAAGAGGAGTCGAGGGTGCT
GGTAGGACTAGGACTTTGGTTGGGGAAAGTTGGTTTTAGCCTTGGCGCCACGAAACTGACGGGCGGCAGTGTCGTAAGCACGTGCAGCCTCCTCGGCGGT
GTCGAAGGTACCGAGCCAAACGCGGCTTTTCTTGGTGGGATCACGGATCTCGGCAGCGTATCGACCCCAAGGCCTCTTACGAACGCCACGGAAATGGAGA
TCCTTAGCATTGTTGTTGGAAAGAGAAGGAAGGGATTTTTGGTTGGCAACCATGGCGGTTGTTAAACGAAAAAGGAGTGGTTGAAGGAGATGTGTAGGTT
GTTTTGAT