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Detailed information on CNT3051148


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 3e-158

BLAST vs NONCODE:
NONTPRT002153, E-value = 4e-86

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201346Cucumis sativusPisum sativum57.5966.5784.13687forward
CNT3044343Cucumis sativusPrunus dulcis57.3377.5585.23684forward
CNT30169884Cucumis sativusPistacia vera57.3369.383.92684forward
CNT30608646Cucumis sativusGossypium raimondii57.4268.383.65685forward
CNT30153569Cucumis sativusPrunus persica57.576.0585.13686forward
CNT3032081Cucumis sativusTheobroma cacao57.6777.1383.58688forward
CNT30334113Cucumis sativusCynara cardunculus57.538.0383.38686forward

Expression of CNT3051148

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKKKEGKRKKKERGGRTLEERNEYDRYREELE

>peptide 2 (40 aa)
MVSELSTSRVMVFPVNVLTKICIPPRRRNTRWRVDSFWML*

>peptide 3 (61 aa)
MSLCWSGGIPSLSWIFAFTLSMVSEDSTSRVMVLPVRVLTKICIPPRRRRTRWRVDSFWML*

>peptide 4 (51 aa)
KIYNAMFISFRKISTHSHKEKHKHFGKSILFNSNNRPPTGQLFPSTKSSTH*

Sequence

>CNT3051148
CGAAGATATACAATGCGATGTTCATTTCATTTAGAAAAATAAGTACACATTCACATAAAGAAAAACACAAACATTTCGGGAAATCAATTTTATTCAACAG
CAATAATAGGCCGCCTACAGGCCAGCTGTTTCCAAGTACCAAATCTTCAACACATTAACATTCAGAAATCATTCAAAGACAATCACCAACACCCAACAAC
ATCCACCACCATCTAAAAACCACCACGGAGACGCAGGACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGCCAGAGTCCTTCCATCTTCAAGC
TGCTTCCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGGATCTTAGCCTTGACGTTATCAATGGTGTCAGAGCTCTCAACCT
CTAGGGTGATGGTCTTTCCGGTCAACGTCTTGACAAAAATCTGCATACCACCACGAAGACGCAACACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATA
ATCAGCAAGGGTACGGCCGTCCTCTAGTTGCTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTTGCCTTCACG
TTATCGATGGTATCAGAGGATTCGACCTCGAGGGTGATGGTTTTACCCGTCAGGGTCTTAACGAAAATTTGCATACCACCACGAAGACGGAGGACCAGGT
GGAGGGTAGACTCCTTCTGGATGTTATAGTCGGCCAAAGTACGGCCATCCTCGAGTTGTTTTCCAGCGAAGATGAGACGTTGCTGATCCGGGGGAATTCC
TTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCAGACGACTCAACCTCAAGGGTGATTGTCTTACCGGTTAGGGTTTTAACGAAGATTTGC
ATCTGCCAGATAAGAAAAAGAAAATAAACAAACAAATAAGAACCCCTTTCTCCAAAATCACAACAACCTGTAAATCACGCGATGATAAGAAATAAAACCT
AAATCGAAACCCTAAAACATCTCAATTCAACAAATATCACAATACCATATAACACAAAAATAAACGAATCAAATTAGATGAACAAAAACCCAAAGAAATG
AAAAAGAAAGAAGGCAAAAGAAAGAAAAAAGAAAGAGGAGGCCGAACCTTGGAAGAAAGAAACGAATATGACAGATACAGAGAAGAATTAGAG