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Detailed information on CNT30511436


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJY5|PUMP5_ARATH, E-value = 1e-111

BLAST vs NONCODE:
NONSLYT003295, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546427Solanum lycopersicumIpomoea triloba9.5420.8383.3390forward
CNT30616300Solanum lycopersicumSesamum indicum37.2224.2780.34351forward
CNT3097992Solanum lycopersicumSolanum tuberosum47.83100.4593.79451forward

Expression of CNT30511436

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MRTIATSAGLPTAAPIPPAINPATIFFDKGMMLVSGSVHFCFSISYKPILVVEYSVCRRTVADTPENKAATPSC*

>peptide 2 (42 aa)
MAPLYGGAIPGSTFMFITRVLITSTGLDAIAATNPAAKLETT*

Sequence

>CNT30511436
CAAAAACTATAAAAAATTTGCTTAATCAAGAATCATTAATTTCCACCAAACAAGAACTCGTTTTTTCATATAGAAGTAACCATAAATAATAATATTAGAA
CACAACATAGTATCACTTTTCCCAAACTTAAAAAACATAAATTCAACTAAACTTTTTTTTTTAAATCCTTAATACTAATTTAATTAATTTTTTTTTCTTC
GTCATCATCATTAAAAATCTTTAAGCATTTTCCTGACTTGTTCCAGTGTGACAAAGAGCACCACAGTAAATGGACCTTGCCTTGAGATTGTAGGAATAAA
TCCCTTATACAATGCCATTGGCCCTTCAGCTTTGATAGTTTTCATTGCACAATCAATGGCCCCACTGTACGGTGGGGCCATTCCCGGCTCGACTTTCATG
TTCATAACACGTGTCTTAATCACATCCACTGGATTAGACGCTATCGCTGCCACAAACCCAGCAGCAAAGCTCGAAACCACATGAGTTCCGAGCCCGTCCT
TCATTAACCCTTTCTCGAGGATAGTCTCTTTGAACTGATCGTACGATGCTAGCTGCGATGCGGTAACTAGCATGGCGCGGCTAGTTACCCCTTCGCTTTT
ACTCATCTGAGTAATTGCATCGATCACGCTTTTGTAGTTGCGGCGTTGAGAGATCGGAAGCCGGCCGTCAGCCTGCATGCGAACCATCGCTACGTCGGCG
GGATTACCAACGGCAGCTCCGATCCCGCCGGCGATTAATCCGGCAACGATCTTCTTCGACAAAGGCATGATGTTAGTATCTGGATCGGTCCATTTCTGCT
TCAGCATATCGTATAAACCCATCCTGGTGGTAGAGTACAGCGTCTGCCGGAGAACAGTCGCTGATACACCGGAAAACAAAGCAGCAACACCTTCTTGTTG
AATAATCTTAACACCAACAGCAACCGGTCCTACACGCGGTGGA