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Detailed information on CNT30511396

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONZMAT001339, E-value = 4e-113

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30696475	Solanum lycopersicum	Oryza sativa	43.39	15.51	92.7	397	forward
CNT30675397	Solanum lycopersicum	Setaria viridis	27.21	78.8	93.17	249	reverse complement
CNT30524664	Solanum lycopersicum	Setaria italica	43.28	28.93	91.92	396	forward
CNT30639555	Solanum lycopersicum	Nymphaea colorata	66.23	35.48	92.74	606	forward
CNT30536068	Solanum lycopersicum	Eucalyptus grandis	66.45	17.65	92.43	608	reverse complement
CNT30513456	Solanum lycopersicum	Juglans regia	66.78	19.25	92.14	611	forward
CNT30378667	Solanum lycopersicum	Arabidopsis thaliana	20.77	16.98	96.84	190	forward
CNT30500477	Solanum lycopersicum	Coffea canephora	66.12	33.22	94.71	605	forward
CNT30616920	Solanum lycopersicum	Sesamum indicum	25.46	23.85	86.7	233	reverse complement
CNT30269781	Solanum lycopersicum	Chenopodium quinoa	66.12	20.47	90.91	605	forward
CNT30730610	Solanum lycopersicum	Corchorus capsularis	66.56	57.29	92.61	609	forward
CNT30525072	Solanum lycopersicum	Phaseolus vulgaris	22.3	47.78	91.67	204	reverse complement
CNT30630109	Solanum lycopersicum	Vigna unguiculata	67.65	19.64	90.79	619	forward
CNT30196858	Solanum lycopersicum	Pisum sativum	66.01	32.53	91.39	604	forward
CNT30503447	Solanum lycopersicum	Nicotiana attenuata	66.01	36.1	95.7	604	reverse complement
CNT30711335	Solanum lycopersicum	Glycine max	33.33	77.81	89.84	305	reverse complement
CNT3044711	Solanum lycopersicum	Prunus dulcis	35.85	68.76	94.51	328	reverse complement
CNT30638683	Solanum lycopersicum	Capsicum annuum	16.61	29.46	94.74	152	reverse complement
CNT3090649	Solanum lycopersicum	Solanum tuberosum	66.01	22.09	96.03	604	forward
CNT30193801	Solanum lycopersicum	Secale cereale	67.21	43.56	90.41	615	forward
CNT30291213	Solanum lycopersicum	Triticum aestivum	67.21	17.7	90.57	615	forward
CNT30221722	Solanum lycopersicum	Hordeum vulgare	33.99	31.73	94.86	311	reverse complement
CNT30384181	Solanum lycopersicum	Triticum turgidum	55.63	78.07	89.78	509	reverse complement
CNT30588765	Solanum lycopersicum	Musa acuminata	47.65	62.46	91.06	436	reverse complement
CNT3089856	Solanum lycopersicum	Vigna radiata	39.13	85.65	93.3	358	reverse complement
CNT30552256	Solanum lycopersicum	Oryza glaberrima	28.42	100.39	91.92	260	reverse complement
CNT30442488	Solanum lycopersicum	Aegilops tauschii	31.37	37.66	94.43	287	forward
CNT30248027	Solanum lycopersicum	Avena sativa	33.55	31.52	92.83	307	reverse complement
CNT30664460	Solanum lycopersicum	Triticum dicoccoides	32.13	81.22	94.56	294	forward
CNT30310298	Solanum lycopersicum	Camelina sativa	33.99	20.39	96.46	311	reverse complement
CNT3062651	Solanum lycopersicum	Arabidopsis lyrata	33.99	37.38	96.78	311	reverse complement
CNT30266045	Solanum lycopersicum	Brassica rapa	31.04	64.11	90.85	284	forward
CNT30612440	Solanum lycopersicum	Arabis alpina	13.77	56	97.62	126	forward
CNT30460907	Solanum lycopersicum	Saccharum spontaneum	67.21	18.46	90.89	615	forward
CNT30136319	Solanum lycopersicum	Lolium perenne	33.88	54.48	94.84	310	reverse complement
CNT3017993	Solanum lycopersicum	Zea mays	67.21	32.68	90.89	615	forward
CNT30655263	Solanum lycopersicum	Rosa chinensis	66.12	33.52	90.25	605	forward
CNT30206293	Solanum lycopersicum	Helianthus annuus	66.12	27.54	94.71	605	forward
CNT30688464	Solanum lycopersicum	Triticum urartu	67.21	33.42	90.57	615	forward
CNT30722943	Solanum lycopersicum	Triticum spelta	47.32	21.51	91.69	433	forward
CNT30596725	Solanum lycopersicum	Oryza meridionalis	67.21	17.82	90.89	615	forward
CNT30357533	Solanum lycopersicum	Lactuca sativa	22.73	20.43	95.67	208	forward
CNT30154922	Solanum lycopersicum	Prunus persica	66.23	35.88	90.59	606	reverse complement
CNT30410854	Solanum lycopersicum	Papaver somniferum	66.01	29.71	94.21	604	forward
CNT30646402	Solanum lycopersicum	Cannabis sativa	33.99	24.58	94.21	311	reverse complement
CNT30319706	Solanum lycopersicum	Asparagus officinalis	66.23	21.09	93.23	606	forward
CNT30332807	Solanum lycopersicum	Dioscorea rotundata	57.92	32.08	92.26	530	reverse complement
CNT30102893	Solanum lycopersicum	Oryza rufipogon	67.32	43.69	89.77	616	forward
CNT30576251	Solanum lycopersicum	Oryza barthii	20.77	33.99	93.68	190	forward
CNT3039583	Solanum lycopersicum	Marchantia polymorpha	20.11	45.43	91.3	184	reverse complement

Expression of CNT30511396

Peptides detected in this lncRNA

>peptide 1 (45 aa)
NKHRSGDSRIGQPFELLLNPWAGKRQPGELKHLSSQRKRKQKRFP*

>peptide 2 (44 aa)
MGDKLHRPEGNNPDHQLRPLNDRSVIKEVGVQRQPGGFPRSSHP*

Sequence

>CNT30511396
AAATAAGCATAGATCCGGAGATTCCCGAATAGGGCAACCTTTCGAACTGCTGCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAATTGAAACATCTT
AGTAGCCAGAGGAAAAGAAAGCAAAAGAGATTCCCGTAGTAGCGGCGAGCAAAATGGGAGCAGCCTAAACCATGAAAATGGGGTTGTGGGAGAGCAATAC
AAGCGTCGTGATGCTAGGCAAATCAGCCTGAATGCTACACCCTAGATGGCGAAAGTCCAGTAGCCAAAAGCATCACTAGCTTACGGTCTGACCCGAGTAG
CATGGGGCACGTGGAATCTCGTGTGAATAATCAAGGACCACCTTGTAAGGCTAAATACTCCTAGGTGACCGATAGCAAAGTAGTACCGTGAGGGAAGGGT
GAAAAGAACCCCCATCAGGAAGTGAAATAGAACATGAAACCGTAAGCTCCCAAGAAGTGGGAGGAGCCAGGGCTCTGACCGCGTGCCTGTTGAAGAATGA
GCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCTACCGGAGCCGTAGAGAAAGTGAGTCTTCGTAGGGCAATTGTCACTGCTTATGGACCCGAAC
CTGGCTGGTTCTCCCCGAAATGCGTTGAGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAGCACTGTTTCAGTGCGAGCCGCGAGAGCGGTACCAAATC
GAGGCAAAATCTGAATACTAGATATGACCTCAAAATAACAGGGGTCAAGGTCGGCTAGTGAGACGATGGGGGATAAGCTTCATCGTCCAGAGGGAAACAA
CCCGGATCACCAGCTAAGGCCCCTAAATGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTTCCTAGAAGCAGCCACCCTTGA
AAGAGTGCATAATAT