Detailed information on CNT3051129


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-114

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727322Cucumis sativusCorchorus capsularis94.4665.7785.41836forward
CNT30312626Cucumis sativusCamelina sativa95.8265.4382.78848forward
CNT3077383Cucumis sativusBrassica juncea96.1665.6684.96851forward
CNT30264722Cucumis sativusBrassica rapa96.1680.4383.78851forward
CNT30623822Cucumis sativusDaucus carota95.4846.9284.38845forward
CNT30356895Cucumis sativusLactuca sativa95.8289.0883.49848forward
CNT30423866Cucumis sativusPapaver somniferum95.5966.1584.16846forward
CNT3036197Cucumis sativusCucumis melo47.0167.9797.6416forward
CNT30174676Cucumis sativusVigna angularis96.0579.3786.35850forward
CNT30111771Cucumis sativusFicus carica96.3868.4685.23853forward

Expression of CNT3051129

Peptides detected in this lncRNA

>peptide 1 (61 aa)
MSLCWSGGIPSLSWIFAFTLSMVSEDSTSRVMVLPVRVLTKICIPPRRRRTRWRVDSFWML*

>peptide 2 (60 aa)
ITNTQQHPPPSKNHHGDAGQGEGLTPSECCNQPESFHLQAASQRRSTSAGLVGFPPCLGS*

>peptide 3 (40 aa)
MVSELSTSRVMVFPVNVLTKICIPPRRRNTRWRVDSFWML*

>peptide 4 (40 aa)
MVSELSTSRVMVFPVNVLTKICIPPRRRNTRWRVDSFWML*

Sequence

>CNT3051129
ATCACCAACACCCAACAACATCCACCACCATCTAAAAACCACCACGGAGACGCAGGACAAGGTGAAGGGTTGACTCCTTCTGAATGTTGTAATCAGCCAG
AGTCCTTCCATCTTCAAGCTGCTTCCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGGATCTTAGCCTTGACGTTATCAATG
GTGTCAGAGCTCTCAACCTCTAGGGTGATGGTCTTTCCGGTCAACGTCTTGACAAAAATCTGCATACCACCACGAAGACGCAACACAAGGTGGAGGGTGG
ACTCCTTCTGGATGTTGTAATCGGCAAGGGTACGACCGTCCTCTAGTTGCTTACCGGCAAAGATAAGTCTTTGTTGGTCTGGGGGAATTCCCTCCTTGTC
CTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCAACCTCTAGGGTGATGGTCTTTCCGGTCAACGTCTTGACAAAAATCTGCATACCACCA
CGAAGACGCAACACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAATCAGCAAGGGTACGGCCGTCCTCTAGTTGCTTACCGGCAAAGATGAGTCTTT
GTTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTTGCCTTCACGTTATCGATGGTATCAGAGGATTCGACCTCGAGGGTGATGGTTTTACCCGTCAG
GGTCTTAACGAAAATTTGCATACCACCACGAAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCATCCTCG
AGTTGTTTTCCAGCGAAGATGAGACGTTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCG