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Detailed information on CNT30511193


BLAST search results

BLAST vs Swiss-Prot:
sp|Q85FN2|ATPH_ADICA, E-value = 3e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535895Solanum lycopersicumEucalyptus grandis7.925.2790140forward
CNT30617713Solanum lycopersicumSesamum indicum33.830.5686.98599forward
CNT30282912Solanum lycopersicumChenopodium quinoa24.139.8384.78427forward
CNT3095993Solanum lycopersicumSolanum tuberosum83.0136.7692.451471forward
CNT30301098Solanum lycopersicumTriticum aestivum21.8452.382.43387forward
CNT30567675Solanum lycopersicumActinidia chinensis16.5932.4982.65294forward
CNT30554216Solanum lycopersicumOryza glaberrima12.5334.0586.04222forward
CNT30145240Solanum lycopersicumMedicago truncatula8.3526.6291.89148forward
CNT30668721Solanum lycopersicumTriticum dicoccoides13.1564.7286.27233forward
CNT30598585Solanum lycopersicumFraxinus excelsior25.5653.1187.86453forward
CNT30205079Solanum lycopersicumHelianthus annuus24.6660.4486.96437forward
CNT30621081Solanum lycopersicumCajanus cajan22.1237.5584.18392forward
CNT30409854Solanum lycopersicumPapaver somniferum23.2562.1486.41412forward
CNT30121210Solanum lycopersicumCitrus clementina23.4810.6885.82416forward
CNT30551824Solanum lycopersicumOryza brachyantha3.5625.8288.8963forward

Expression of CNT30511193

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSFFHNVSQAFMLDSILFENHASKHLEGFDYSYSSTDTSSPFLKY*

Sequence

>CNT30511193
TGCTATTTAAACTAAATCGTTTCGTTTTTGTAATTTTGTAATTGTTCCAAAGTTTTATAAGTTGAATTAATCAAATTGAATTTTTCTCGTTCTATCTCAG
AGTATCCATTCACTCAAAACTGCTCGGCTTTGGTTTCTACTTTCCGTAAACGAGAACGATCTTTTTCGAGTTGTTTAATAGCCACCCCCCCACGCAATTT
TTCTGAATTTCGAATAGTATTCAAGATCCTCTGTTTTTGATTATCTGATAAATCACTTAACACTCCCTTTCCAAAAAAATCAATACTCCAAGAACTACAC
TTAGATTTATTGGATTTGTTGCTAAAATATCGGTATTAAACCCGAAAATCCTGGCAGATAGATAGTGGCCCAAAGAAATGAAAGTATCGGTTACGTTTTT
CATATGATCTCCTCTTATAAATAGATTAAAAAATAGAACAGAGTTCTTTTTGTAGCACTTCGCCCCTCTTTTTATTTATTCTTTTGTTTTTTCTGAAATT
GAGTAAAATAATAAAAAATATTCGAGTTAGATAGAAATTATGAACTAATGAACTAGCCCTTTTATTGGTTTTTGGAACACTAAAACTTACTAATAAGAGT
TTCCCTTGGTCTAGAACAGGAAGGATGAAAGCGAGTCAGTAGTCTAATTCCTCATCCGTAAATCAGCCCTTCCCCTAGGTTCTTTTCTCAAAGAATAAAG
AATGGTAGGGGGGAAATCTTGATAGAATTTGAAAAAGCAAACAACAAGTTGAAGGCAATAAAATATGAAAAAGAAATATATTTTTCATATTTCTAAGCTA
AGATTAAACAAAAGGATTTGCAAATAAAAGTGCTAATGCTACAACCAGTCCATAAATTGTTAAATCTTCCATAAAAGCTAGACTAAGCAATAGCGTACCT
CGTATTTTGCCCTCTACCTCAGGCTGTCTCGCGATCCCCTCTACAGCTTGACCCACAGCAGTCCCTTTACCAACTCCAGGTCCAATAGAAGCAAGCCCTA
CGACCAATCCAGCAGCAGTAGTGGAAGCGGCAGAAATAAGTGGATTCATGATAAGTTCCCCGTACCAAAAAAAGAAATGGTTAATGATACAATCAAACCA
ATGAATTAGGACTTAGTTATTCCCTCACTAGGACTCATCCAGTCGAAGTAACTAAGAACATTGGATTTAAGTAATAACATTCTTGAATCATCAAAACAAC
TTCGATATATCTTTTTTATTTTTTTGCCACAGAGTCTTTCTGAACCTATAAGACTTTCATTCTTCCATTTCTTGTTCTTGGTTCGAACTGTTAGTTGAAT
TATTTCTTGATTTCATCTGTTTATTCATTCAATTCACACTTAGTAGGGGTCGGAAGAACTTCTAGTCTATTTGAATCCCCTAGAAAAATATATCTTTAGT
AGTTAATTTCATATATAACTAGCACTAGGCAATATCTAATATCACATATACATGTCTTTCTTCCATAATGTAAGCCAAGCATTCATGTTAGATTCAATCC
TATTCGAGAATCATGCGTCAAAACATCTAGAAGGGTTCGATTATAGTTATTCAAGTACAGATACCTCCAGCCCCTTTCTAAAATACTAAAAAAAACTTTT
GAAAAATTCTTTTGAATCTTACCTTTTCTTATTATTCCACCTAGAGAAATCTATATGGACAAATTGATTAGAACGACAAATTCCATAGGAATAGAAATAT
CATTATTTGATTGATCTAAGTTCATGCACTTTATTAATAAAATTGAATAAAAAAAATATTCATTTTTATAAT