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Detailed information on CNT30511101


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2MIB2|ATPI_SOLLC, E-value = 3e-96

BLAST vs NONCODE:
NONATHT002192, E-value = 1e-98

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Solanum lycopersicumOryza sativa58.3912.6185.13713forward
CNT30317837Solanum lycopersicumCorylus avellana40.3846.8684.99493forward
CNT30703171Solanum lycopersicumQuercus lobata61.516.387.35751forward
CNT3021394Solanum lycopersicumCitrullus lanatus50.4598.2589.12616forward
CNT30198909Solanum lycopersicumPisum sativum44.5524.1185.48544forward
CNT30505351Solanum lycopersicumNicotiana attenuata10035.1393.21221forward
CNT30291829Solanum lycopersicumTriticum aestivum58.3918.0984.85713forward
CNT30226738Solanum lycopersicumHordeum vulgare25.3923.7782.9310forward
CNT30541450Solanum lycopersicumBrassica napus61.8326.8685.17755forward
CNT30238613Solanum lycopersicumBrassica oleracea21.2950.183.08260forward
CNT30172770Solanum lycopersicumTrifolium pratense36.4587.2582.47445forward
CNT3017990Solanum lycopersicumZea mays58.3921.5585.97713forward
CNT30232563Solanum lycopersicumAnanas comosus61.3421.8686.38749forward
CNT30626489Solanum lycopersicumDaucus carota17.1223.8393.3209forward
CNT3057337Solanum lycopersicumAmborella trichopoda61.5920.1882.31752forward
CNT30726491Solanum lycopersicumLupinus angustifolius61.6764.6485.66753forward

Expression of CNT30511101

Peptides detected in this lncRNA

>peptide 1 (58 aa)
SLYIVYNIVVYLESPILFRNLSNSLKPSTIYIYTLLWANLKKTISMMALHGFTYISRG*

>peptide 2 (31 aa)
MEHDRTLILPCPLKKSNFKTKFFYSTISLST*

>peptide 3 (58 aa)
MIFKGKRSPDQLETKKIKHCANKRNPGPIFFSNLSFTNISNEFKNIFEETLTPSRNGL*

>peptide 4 (37 aa)
MVCRFRTAIVAEHNKIAITTHGVISTWPCTWKPPICQ*

>peptide 5 (32 aa)
MTGIGTTKGTKETRSTTTNSSAKIFQKSQKTK*

Sequence

>CNT30511101
TATCACTCTACATCGTATATAACATAGTTGTATATTTAGAATCCCCTATTCTATTCCGTAACTTAAGTAATTCTCTTAAGCCATCCACCATATACATTTA
TACATTGCTGTGGGCTAATCTAAAAAAGACTATTTCAATGATGGCCCTCCATGGATTCACCTATATAAGCCGCGGCTAAAGTTGCAAAAATAAGAGCTTG
AATACCACTTGTAAATAATCCAAGGAGCATGACAGGTATAGGAACTACTAAGGGTACTAAAGAAACAAGATCAACAACTACTAATTCATCAGCTAAGATA
TTCCAGAAAAGTCAAAAAACTAAGTGATAATGGTTTTGTGAAATATTCTATGATGTTAATGGGTAAAAGTATTGTGGTTGGTTGAATATATTTTGCGAAA
TTACCTAATCCCCTTTTTGTAAGACCCGCATAGAAATATGCAACGGATGTGAGTAAAGCCAAAGCAACAATAGTATTTATATCATTCGTAGGTGGGCTAA
CTCCCCTTGAGGTAATTGTATGATTTTCAAAGGTAAAAGATCTCCTGACCAATTAGAAACAAAAAAAATAAAACATTGTGCCAATAAAAGGAACCCAGGG
CCCATATTCTTCTCCAATTTGAGTTTTACTAACATCTCGAATGAATTCAAGAACATATTCGAAGAAACTCTGACCCCCAGTCGGAATGGTTTGTAGGTTC
CGAACAGCTATAGTGGCTGAACATAATAAAATAGCAATTACAACCCACGGAGTAATAAGTACTTGGCCATGTACTTGGAAACCTCCTATTTGCCAATAGA
AATGTTGGCCTACTTTCACACCGGATATATCGTATAACCCCTTTAGAGTACTGATGGAACATGATAGAACACTCATATTGCCTTGCCCTCTGAAAAAATC
GAACTTCAAAACAAAATTTTTTTATTCAACCATCTCTTTGTCTACTTGAATCACATATTTTGAATACCAACTAAGATTTAGAATACTAATAAATCACATA
ATATCCCCAGTTATTTTGATCTATTTTTGGAAATTCAGAAATAGTTAGCGATTCCATAAGGGATTTCTAGGGATTTTCTGAATTAAGTTATTTATCTTAT
TATGTTATTATTAATCAAGGATTTCGTATATAGCTAGAACGACCCTCACAAATTGCGAATACTAATTTGTTAAGAATTAATCGGATTGAGGATATGGCGT
CATCATTCGCTGGAATTGCAA