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Detailed information on CNT30511058


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30522713Solanum lycopersicumSetaria italica35.1522.6485.7184forward
CNT30516889Solanum lycopersicumJuglans regia55.6521.9884.96133forward
CNT30377262Solanum lycopersicumArabidopsis thaliana56.923.2986.76136forward
CNT30617295Solanum lycopersicumSesamum indicum54.3931.7190130forward
CNT30168132Solanum lycopersicumPistacia vera23.4313.6387.556forward
CNT30291318Solanum lycopersicumTriticum aestivum47.2833.9385.84113forward
CNT30706519Solanum lycopersicumPrunus avium57.7416.6586.23138forward
CNT3057373Solanum lycopersicumAmborella trichopoda35.5615.687.0685forward
CNT30328090Solanum lycopersicumAsparagus officinalis56.940.2485.29136forward
CNT3099978Solanum lycopersicumOryza rufipogon55.6516.4284.21133forward
CNT30575061Solanum lycopersicumOryza barthii56.914.9683.09136forward
CNT30333708Solanum lycopersicumCynara cardunculus56.916.7985.29136forward

Expression of CNT30511058

Peptides detected in this lncRNA

>peptide 1 (78 aa)
AHIMFLASHICWVSSGTVSARYCCEPREVRGANPTMKKCKRGKGIRVQLTREPEAASDPTHRSGNQVVQITNCNMIMHL

Sequence

>CNT30511058
CAGCACACATCATGTTTTTGGCATCCCACATTTGCTGGGTCAGCTCTGGGACTGTAAGTGCACGGTATTGCTGTGAACCACGAGAAGTGAGAGGAGCAAA
TCCAACCATGAAGAAGTGCAAACGAGGGAAGGGGATCAGAGTTCAATTGACCCGGGAACCTGAGGCAGCAAGTGACCCCACTCATCGTAGCGGAAATCAA
GTGGTTCAAATCACCAACTGCAACATGATAATGCATTTA