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Detailed information on CNT30511018


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30503674Solanum lycopersicumNicotiana attenuata78.3678.6287.45239forward

Expression of CNT30511018

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MGALMWWDIGLHQMVGLGGLVSGLPYPSSELDHVAQLKKWAA*

>peptide 2 (70 aa)
PSLVMWACNPNGGINVVGYWAAPDGWAWWASFWLALSKLRVGSRGPIEEMGCLIPKVWRERVRLVLQSNE*

Sequence

>CNT30511018
GCCGAGCTTAGTAATGTGGGCTTGTAACCCAAATGGGGGCATTAATGTGGTGGGATATTGGGCTGCACCAGATGGTTGGGCTTGGTGGGCTAGTTTCTGG
CTTGCCCTATCCAAGCTCAGAGTTGGATCACGTGGCCCAATTGAAGAAATGGGCTGCTTGATTCCTAAAGTTTGGCGGGAACGCGTGAGGCTGGTTTTAC
AGAGCAACGAATAGCTTTTGCTCTAAGCAGTGGAAGGATAACGAGTCGGTGCCTCCCAAGTTCAGTTAACGCCTGATGGGCTGCTCTAATTAAACCACTA
CTTTT