« Back to Solanum lycopersicum search


Detailed information on CNT30511017


BLAST search results

BLAST vs Swiss-Prot:
sp|P68172|SAHH_NICSY, E-value = 4e-104

BLAST vs NONCODE:
NONGMAT001730, E-value = 2e-21

Expression of CNT30511017

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MSFTLYSRPEVVFSTSRAMGKASIREKKGFKMRSERLFSSSFGVFQGRRR

>peptide 2 (67 aa)
MLQEHHLTSAPKAVRVSIRTAVWIVICRDPVIFAPLKGCEGPNSAREAMRPGISTSASSISSLPKSA*

>peptide 3 (76 aa)
RIWDCSILSKLLFSLNTLMNQQSSITSIINNQIRTTTWTPIKCPLSTPPVLLQSLTFPGKNSSTVTCNGCCSMVLS*

Sequence

>CNT30511017
CTAGGATCTGGGATTGTTCCATTCTTAGCAAACTCCTCTTCAGCCTTAACACCCTCATGAATCAACAGAGTAGCATCACCTCCATCATCAACAATCAGAT
CAGGACCACCACCTGGACCCCAATCAAGTGCCCTCTCAGTACACCACCAGTACTCCTGCAAAGTCTCACCTTTCCAGGCAAAAACAGCAGCACTGTCACG
TGCAATGGCTGCTGCAGCATGGTCCTGAGTTGAGAAGATGTTGCAAGAACACCATCTAACTTCAGCACCCAAAGCAGTTAGGGTTTCAATAAGAACAGCA
GTTTGGATAGTCATATGCAGAGATCCAGTGATCTTTGCACCTTTAAAGGGCTGTGAAGGGCCAAATTCAGCACGGGAAGCCATGAGACCAGGCATTTCAA
CTTCAGCAAGCTCGATTTCGAGCCTGCCGAAGTCAGCCTGAGACATGTCCTTCACCTTGTACTCGCGGCCAGAGGTGGTCTTCTCAACGAGTAGAGCCAT
GGGTAAGGCGAGTATAAGAGAAAAGAAAGGGTTTAAGATGAGATCTGAGAGGCTTTTCTCTTCTTCCTTTGGGGTTTTTCAGGGAAGAAGAAGAAT