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Detailed information on CNT3051100


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-116

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019912Cucumis sativusCitrullus lanatus64.4654.8284.83916forward
CNT30710308Cucumis sativusGlycine max47.0872.486.1669forward
CNT30622888Cucumis sativusDaucus carota64.3953.5484.48915forward
CNT30359535Cucumis sativusLactuca sativa64.1153.9482.55911forward
CNT3032244Cucumis sativusTheobroma cacao64.4679.7283.73916forward
CNT30120599Cucumis sativusCitrus clementina64.1891.4782.24912forward
CNT30334111Cucumis sativusCynara cardunculus64.2583.4683.02913forward

Expression of CNT3051100

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKKKEGKRKKKERGGRTLEERNEYDRYREELE

>peptide 2 (40 aa)
MVSELSTSRVMVFPVNVLTKICIPPRRRNTRWRVDSFWML*

>peptide 3 (61 aa)
MSLCWSGGIPSLSWIFAFTLSMVSEDSTSRVMVLPVRVLTKICIPPRRRRTRWRVDSFWML*

>peptide 4 (51 aa)
KIYNAMFISFRKISTHSHKEKHKHFGKSILFNSNNRPPTGQLFPSTKSSTH*

Sequence

>CNT3051100
CGAAGATATACAATGCGATGTTCATTTCATTTAGAAAAATAAGTACACATTCACATAAAGAAAAACACAAACATTTCGGGAAATCAATTTTATTCAACAG
CAATAATAGGCCGCCTACAGGCCAGCTGTTTCCAAGTACCAAATCTTCAACACATTAACATTCAGAAATCATTCAAAGACAATCACCAACACCCAACAAC
ATCCACCACCATCTAAAAACCACCACGGAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCGAGAGTCCTCCCATCTTCAAGC
TGCTTCCCAGCGAAGATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATTTTAGCTTTCACATTATCGATCGTGTCGGAGCTCTCCACCT
CCAAGGTGATGGTCTTTCCAGTCAGGGTCTTAACAAAAATTTGCATTCCACCCCTGAGACGAAGCACCAAATGCAAGGTTGACTCCTTCTGAATGTTGTA
ATCAGCCAGAGTCCTTCCATCTTCAAGCTGCTTCCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCTTGGATCTTAGCCTTGACG
TTATCAATGGTGTCAGAGCTCTCAACCTCTAGGGTGATGGTCTTTCCGGTCAACGTCTTGACAAAAATCTGCATACCACCACGAAGACGCAACACAAGGT
GGAGGGTGGACTCCTTCTGGATGTTATAATCAGCAAGGGTACGGCCGTCCTCTAGTTGCTTACCGGCAAAGATGAGTCTTTGTTGGTCTGGGGGAATTCC
CTCCTTGTCCTGGATCTTTGCCTTCACGTTATCGATGGTATCAGAGGATTCGACCTCGAGGGTGATGGTTTTACCCGTCAGGGTCTTAACGAAAATTTGC
ATACCACCACGAAGACGGAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGCCAAGGTACGGCCATCCTCGAGTTGTTTTCCAGCGAAGA
TGAGACGTTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTATCAGACGACTCAACCTCAAGGGTGATTGTCTT
ACCGGTTAGGGTTTTAACGAAGATTTGCATCTGCCAGATAAGAAAAAGAAAATAAACAAACAAATAAGAACCCCTTTCTCCAAAATCACAACAACCTGTA
AATCACGCGATGATAAGAAATAAAACCTAAATCGAAACCCTAAAACATCTCAATTCAACAAATATCACAATACCATATAACACAAAAATAAACGAATCAA
ATTAGATGAACAAAAACCCAAAGAAATGAAAAAGAAAGAAGGCAAAAGAAAGAAAAAAGAAAGAGGAGGCCGAACCTTGGAAGAAAGAAACGAATATGAC
AGATACAGAGAAGAATTAGAG