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Detailed information on CNT30510913


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30548493Solanum lycopersicumIpomoea triloba51.6147.5892.97384forward
CNT30405728Solanum lycopersicumBeta vulgaris44.0929.0389.33328forward
CNT30201968Solanum lycopersicumPisum sativum35.8933.4294.01267reverse complement
CNT30164425Solanum lycopersicumPistacia vera37.3714.9894.6278forward
CNT30181606Solanum lycopersicumSecale cereale36.4215.9291.51271reverse complement
CNT30307642Solanum lycopersicumTriticum aestivum36.4231.2691.51271reverse complement
CNT30592657Solanum lycopersicumMusa acuminata27.555.8286.34205reverse complement
CNT30544645Solanum lycopersicumBrassica napus33.8722.5494.44252reverse complement
CNT30239187Solanum lycopersicumBrassica oleracea35.8921.9692.88267reverse complement
CNT3079706Solanum lycopersicumBrassica juncea35.8923.6394.76267reverse complement
CNT30681493Solanum lycopersicumTriticum urartu36.4216.291.51271reverse complement
CNT30104396Solanum lycopersicumOryza rufipogon52.1536.1387.37388reverse complement

Expression of CNT30510913

Peptides detected in this lncRNA

>peptide 1 (41 aa)
KIEYKDYIKNGGDKGKRWDWVQKKLLLITLSSSCCSGGLIE*

>peptide 2 (37 aa)
MGLGPKEAAADYLVKLLLLGGTHRVDLRNWSTQKMHQ*

>peptide 3 (35 aa)
MLGWATSNDVGRMKGDQHLWFLGESSRKIGRRPPD*

Sequence

>CNT30510913
ACAAGATTGAATACAAGGACTACATTAAAAATGGTGGTGACAAGGGTAAACGATGGGATTGGGTCCAAAAGAAGCTGCTGCTGATTACCTTGTCAAGCTC
TTGCTGCTCGGGGGGACTCATCGAGTAGATCTGAGGAATTGGAGCACTCAGAAGATGCATCAATGATGGCAGGAGAGGATAATGATAATGCTTTCAGTTC
ACTCTTCGTTCTCGTTGCAAAGTGAGCAGATGATGACAATGAAAAGGATTTGCGAATGAATGTTGGGCTGGGCCACCTCGAATGACGTGGGCCGCATGAA
GGGAGACCAGCACTTATGGTTTTTAGGCGAATCTAGTCGAAAAATCGGTCGGCGCCCACCTGACTAGAGGGACTGAGAAATTAATTGAGTACAAAACTTA
TCTTCAAGCTTTACCTTATTCTGATCATTCAGAGGGCAATCGCGGGGTCACTGAATAAAGTCCTCCGTTTCTTTAGGAGGTTCTGACCCGCAGCGAGGCA
GAGATGACTAAGTGACATATGGAATATGGCGACGACAACAACATGTCGTAGAAGGAGATAACAGGTGGAGCCAACGACCCACTAAGACTAACCTATCTAC
AACTACATCCCCGAGCGGCAGTCAAACGTTCCAAACTTAAACTTTTTTCATGGTGAAATAAATTTGACGATGCCACAAACAAAAATGGCAAGAAATTATA
TTTTCAATTATCAAATTCTACATTCGCAACAAATAATTTTAGCG