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Detailed information on CNT30510830


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30202525Solanum lycopersicumHelianthus annuus15.5520.7590.9144forward

Expression of CNT30510830

Peptides detected in this lncRNA

>peptide 1 (41 aa)
MLGWSSKWLGLYLACPIEVQSWALWSNRRSGLLFPKAERTA*

>peptide 2 (93 aa)
LGSITWACNPSGGISVVECWAGHPNGWAYIWPALSKYRVGPCGPIEGVGCYFLKRNGLREVGFTEQRIVPALSVGRIARRCLPSPRIVRWAAPL

Sequence

>CNT30510830
GCTGGGCTCAATAACATGGGCTTGTAACCCAAGTGGGGGCATTAGTGTGGTGGAATGTTGGGCTGGTCATCCAAATGGTTGGGCTTATATCTGGCCTGCC
CTATCGAAGTACAGAGTTGGGCCTTGTGGTCCAATCGAAGGAGTGGGCTGCTATTTCCTAAAGCGGAACGGACTGCGTGAGGTTGGTTTCACAGAGCAAC
GAATAGTTCCTGCTCTAAGCGTTGGAAGGATAGCACGTCGATGCCTTCCGAGTCCCAGAATCGTCAGATGGGCTGCTCCACTT