Detailed information on CNT30510798


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SWF5|SAHH_SOLLC, E-value = 8e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30585997Solanum lycopersicumMusa acuminata34.3635.1884.2789forward
CNT30659902Solanum lycopersicumTriticum dicoccoides35.5229.8783.792forward
CNT30681317Solanum lycopersicumTriticum urartu35.5218.7882.6192forward
CNT30720265Solanum lycopersicumTriticum spelta35.5233.8283.792forward
CNT30570728Solanum lycopersicumVitis vinifera35.9116.6486.0293forward

Expression of CNT30510798

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MSFTLYSRPEVVFSTSRAMGKASIREKKGFKMRSERLFSSSFGVF

>peptide 2 (64 aa)
EGPNSAREAMRPGISTSASSISSLPKSAWDMSFTLYSRPETCPSPCTRGQRWSSQRVEPWVRRV*

Sequence

>CNT30510798
TGAAGGGCCAAATTCAGCACGGGAAGCCATGAGACCAGGCATTTCAACTTCGGCAAGCTCGATTTCGAGCCTGCCGAAGTCAGCCTGGGACATGTCCTTC
ACCTTGTACTCGCGGCCAGAGACATGTCCTTCACCTTGTACTCGCGGCCAGAGGTGGTCTTCTCAACGAGTAGAGCCATGGGTAAGGCGAGTATAAGAGA
AAAGAAAGGGTTTAAGATGAGATCTGAGAGGCTTTTCTCTTCTTCCTTTGGGGTTTTTC