Detailed information on CNT30510767


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZC0|UXS1_ARATH, E-value = 2e-47

BLAST vs NONCODE:
NONBNAT000454, E-value = 2e-16

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30318541Solanum lycopersicumCorylus avellana26.0446.783.11219forward
CNT30500451Solanum lycopersicumCoffea canephora29.8523.5284.46251forward
CNT30504810Solanum lycopersicumNicotiana attenuata30.0838.8690.91253forward
CNT30636701Solanum lycopersicumCapsicum annuum30.4462.2992.58256forward
CNT30343308Solanum lycopersicumEragrostis tef17.9555.1180.79151forward
CNT30579496Solanum lycopersicumEchinochloa crusgalli10.5822.7684.2789forward
CNT30336663Solanum lycopersicumCynara cardunculus30.0854.1884.98253forward

Expression of CNT30510767

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MISRMKIITTIEASETRIASTDFISLKSRPKQLC*

>peptide 2 (45 aa)
MPKYPCPVNIGSYGSGIHITILYNTDRLSAGEKAKATQGHFRHAL*

>peptide 3 (37 aa)
TYWIHMTPICFLLRMLKRIAINLTCTGKQELSTNSPG*

>peptide 4 (39 aa)
MVNLMYFQQDSLNNIMSKTQKKPHPLVMSKTHHFFHKGC*

Sequence

>CNT30510767
ACACCTATTGGATTCACATGACCCCAATATGTTTCCTTTTGAGGATGCTCAAGCGGATCGCCATAAACCTCACTTGTACTGGTAAGCAAGAACTTAGCAC
CAACTCTCCTGGCTAGCCCCAACATGTTAAGGGTGCCCATCACATTTGATATAATAGTTTTGACAGGATTATACTTGTAGTGAACTGGAGAAGCAGGACA
AGCCAAATGGTAAATCTGATGTACTTCCAACAAGATAGTCTCAACAACATCATGTCAAAGACACAAAAAAAACCACATCCACTGGTAATGTCAAAGACGC
ATCATTTTTTTCACAAGGGATGTTGAAGACACATCATTGATGATTTGAGCATGTCTGAACATATTTTACACTTTTAGACTGTTGGAATCATGCCTAAGTA
CCCTTGCCCTGTGAATATTGGCTCTTACGGCTCTGGGATACACATAACTATATTATATAATACAGATAGACTCAGTGCAGGTGAAAAAGCAAAGGCAACA
CAAGGTCATTTTCGACATGCTCTTTAACCTTCTCACTCCCCCCACACCCCACCACCTTAAAAGGGGAAAAAGTGAGAAAACACTCTTTTTGTTGTAGTTT
GGTTTCCTTTTTCCTGAAGAAATAAACTCATCCACCACAAAAATTATGATCTCTAGAATGAAAATCATAACAACAATAGAGGCTTCAGAAACACGGATTG
CTTCAACAGATTTTATCTCTTTAAAGAGTCGACCTAAGCAACTTTGCTGATCATGGTCAAGCCAACTTAAGTCACAAGGATAAGCAGTAGTTCAGGAATC
ATAAGTGACAATCAAAAGATAGAAGCAAATACAGAATTGTG