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Detailed information on CNT30510660


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ASR1|EF2_ARATH, E-value = 1e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30210789Solanum lycopersicumHelianthus annuus52.759.3986.05215forward

Expression of CNT30510660

Peptides detected in this lncRNA

>peptide 1 (86 aa)
SRLFNRTNNHRIRLSQTFQPFDKLGKVRCDLALNSYTHNCTSNNMLSRLFNRTNNHRIRLSQTFQPFNKLGKVRCDLALNSYTHNW*

>peptide 2 (32 aa)
PDSSIEQTTIGSDLARRFNPSTSLGRSDATLH*

Sequence

>CNT30510660
CTCCAGACTCTTCAATAGAACAAACAACCATAGGATCAGACTTAGCCAGACGTTTCAACCCTTCGACAAGCTTGGGAAGGTCAGATGCGACCTTGCACTG
AACAGCTACACGCACAACTGCACCAGCAATAATATGCTCTCCAGACTCTTCAATAGAACAAACAACCATAGGATCAGACTTAGCCAGACGTTTCAACCCT
TCAACAAGCTTGGGAAGGTCAGATGCGACCTTGCACTGAACAGCTACACGCACAACTGGTGAGACAGAAAACTTCATTGCTCTGATAGGGTGAGCATCGA
CTTCCTTTTCATTGGTCAATGTTGCATTCTTGGTAATAAACTGATCCAAACCAACCATGGCAACAGTGTTACCACAGGGAACATCCTCAACAGTTTCTTG
CCTCTTAC