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Detailed information on CNT30510227


BLAST search results

BLAST vs Swiss-Prot:
sp|P36181|HSP80_SOLLC, E-value = 3e-105

BLAST vs NONCODE:
NONSLYT002404, E-value = 2e-161

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675624Solanum lycopersicumSetaria viridis22.7242.1685.34266forward
CNT30378101Solanum lycopersicumArabidopsis thaliana22.830.2784.64267forward
CNT3019808Solanum lycopersicumCitrullus lanatus24.3442.5488.07285forward
CNT30729348Solanum lycopersicumCorchorus capsularis39.9751.7179.49468forward
CNT30379140Solanum lycopersicumManihot esculenta40.9957.0784.17480forward
CNT30526134Solanum lycopersicumPhaseolus vulgaris41.0875.5186.69481forward
CNT30630919Solanum lycopersicumVigna unguiculata41.0836.1185.45481forward
CNT30712340Solanum lycopersicumGlycine max11.1922.7888.55131forward
CNT3043899Solanum lycopersicumPrunus dulcis14.0133.482.93164forward
CNT30158908Solanum lycopersicumPistacia vera25.7918.4881.13302forward
CNT30636154Solanum lycopersicumCapsicum annuum20.6752.3892.15242forward
CNT3094731Solanum lycopersicumSolanum tuberosum3829.6593.93445forward
CNT30187977Solanum lycopersicumSecale cereale23.437.9587.59274forward
CNT30298345Solanum lycopersicumTriticum aestivum17.5929.2683.5206forward
CNT30394033Solanum lycopersicumTriticum turgidum26.8123.2187.26314forward
CNT30566784Solanum lycopersicumActinidia chinensis27.0741.7185.17317forward
CNT30145670Solanum lycopersicumMedicago truncatula12.7236.6189.93149forward
CNT30314068Solanum lycopersicumCamelina sativa39.5430.5485.1463forward
CNT3082269Solanum lycopersicumBrassica juncea29.9754.1784.9351forward
CNT30606420Solanum lycopersicumGossypium raimondii28.157.6285.41329forward
CNT30652736Solanum lycopersicumRosa chinensis20.9242.3186.12245forward
CNT30625209Solanum lycopersicumDaucus carota29.7251.5683.05348forward
CNT30688537Solanum lycopersicumTriticum urartu6.432.4789.3375forward
CNT30477326Solanum lycopersicumArabidopsis halleri32.1142.5384.57376forward
CNT30362691Solanum lycopersicumSorghum bicolor33.4839.6485.46392forward
CNT30704690Solanum lycopersicumPrunus avium40.7323.4784.7477forward
CNT3055928Solanum lycopersicumAmborella trichopoda16.4821.9882.38193forward
CNT30323609Solanum lycopersicumAsparagus officinalis37.2326.1985.55436forward
CNT30584451Solanum lycopersicumEchinochloa crusgalli9.3120.3482.57109forward
CNT30551470Solanum lycopersicumOryza brachyantha28.3576.3285.54332forward
CNT30113681Solanum lycopersicumFicus carica39.0362.7779.65457forward
CNT30724273Solanum lycopersicumLupinus angustifolius21.2643.2383.13249forward

Expression of CNT30510227

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MLFPIISQALVESSILFLCDLFWLSHPNRLLLVHQ*

>peptide 2 (64 aa)
MLRGRSSESTIPFTKLKYSGINSSQLSMINTRRTYNLMLLGFFFVSKRSKGALFGTKRTALNSN*

>peptide 3 (82 aa)
MMEFSGACAFIILSMLAVQPYSPVTKQQGESTTRSETMTFSTLSPSTSFITLHSPSNFSFNSSCFFFSSSLSSSLRFLENAS*

>peptide 4 (35 aa)
MLACQHQHLRFPHQCSNRVSTSCEFCCQRCLAPRG*

>peptide 5 (57 aa)
MNLINLLHLAALSISFRILQCWHVSISISAFLINAQTEFQHPVNSVAKGVWLLEAET*

Sequence

>CNT30510227
TGGGATAAAGCAAAAACTAGGGAATAAAGTAGTAGTAAAGGAACCCATAAAACTATCAAAACATTAATGAACTTAATCAACCTCCTCCATCTTGCTGCCC
TCAGCATCAGCTTCAGGATCCTCCAATGCTGGCATGTCAGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAACATCCTGTGAATTC
TGTTGCCAAAGGTGTTTGGCTCCTCGAGGCTGAAACCTGAGGTGAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTT
GTCTGCATCAGCCCTCTTCCTTAGCTCATCCATGATGGAGTTCTCTGGTGCCTGTGCCTTCATAATTCTCTCCATGTTAGCAGTCCAGCCATACTCACCA
GTGACCAAACAGCAGGGAGAGTCAACAACACGGTCAGAAACAATGACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAA
ACTTCTCCTTCAATTCTTCCTGCTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGTTTTTAGAGAACGCCTCATAGAACTTATTGTAGTCCTCCTT
GTTCTCAGCAATTTCAAAGAAAAGCTCAACACACTTCTTCACCAAATTCTTGCGAATAACCTTTAGGATCTTGTTCTGCTGCAATGTCTCTCTGGAGATG
TTGAGAGGAAGGTCCTCAGAATCCACAATACCCTTCACAAAGCTCAAATATTCAGGAATCAACTCATCACAGTTATCCATGATAAACACACGGCGAACAT
ACAACTTGATGTTGTTGGGCTTCTTCTTTGTGTCAAAGAGGTCAAAAGGAGCCCTTTTTGGAACAAAAAGGACAGCCTTGAACTCCAACTGACCCTCAAC
AGAGAAGTGCTTCACAGCAAGATGCTCTTCCCAATCATTAGTCAAGCTCTTGTAGAAAGCAGCATACTCTTCCTTTGTGATCTCTTCTGGCTTTCTCATC
CAAATAGGCTTCTGCTTGTTCACCAGTGACCACTCATTGGAAACTTCTTTGACCTTCTTCTTTTTCTTCTCTTCCTTCTCCTTTTCCTCATCGACCTCCT
CTACCTTTCCCTCCTCATCTTTCTTCTCCTCTTCCTCCTCATCATCAGAAATTTCCTTCTCTATGGTCTTC