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Detailed information on CNT30510145


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH33|UBQ11_ARATH, E-value = 2e-150

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-126

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30377699Solanum lycopersicumArabidopsis thaliana45.7976.4484.51652forward
CNT30381201Solanum lycopersicumManihot esculenta48.3872.9984.18689forward
CNT30630785Solanum lycopersicumVigna unguiculata48.3180.6684.88688forward
CNT30506305Solanum lycopersicumNicotiana attenuata48.4673.1786.09690forward
CNT30710308Solanum lycopersicumGlycine max45.8670.6786.22653forward
CNT3044330Solanum lycopersicumPrunus dulcis48.2456.1787.63687forward
CNT30636043Solanum lycopersicumCapsicum annuum48.6744.3787.01693forward
CNT3095105Solanum lycopersicumSolanum tuberosum4656.3794.81655forward
CNT3089456Solanum lycopersicumVigna radiata47.5445.584.64677forward
CNT30540607Solanum lycopersicumBrassica napus48.1746.4885.86686forward
CNT30233220Solanum lycopersicumBrassica oleracea44.882.3285.11638forward
CNT30171188Solanum lycopersicumTrifolium pratense48.6744.2585.43693forward
CNT30311059Solanum lycopersicumCamelina sativa48.3854.5587.52689forward
CNT3077671Solanum lycopersicumBrassica juncea48.6771.2285.86693forward
CNT30260853Solanum lycopersicumBrassica rapa48.3876.7385.63689forward
CNT30612915Solanum lycopersicumArabis alpina48.3870.7487.08689forward
CNT30652435Solanum lycopersicumRosa chinensis48.3864.0386.5689forward
CNT30623089Solanum lycopersicumDaucus carota48.2439.7885.74687forward
CNT30477816Solanum lycopersicumArabidopsis halleri48.3885.2787.23689forward
CNT30359105Solanum lycopersicumLactuca sativa47.9646.4384.04683forward
CNT30153569Solanum lycopersicumPrunus persica47.8975.6187.1682forward
CNT30425514Solanum lycopersicumPapaver somniferum44.0345.2186.76627forward
CNT30643414Solanum lycopersicumCannabis sativa47.9664.9284.04683forward
CNT3026462Solanum lycopersicumPopulus trichocarpa48.1775.7284.84686forward
CNT30326890Solanum lycopersicumAsparagus officinalis44.8751.7885.6639forward
CNT30111740Solanum lycopersicumFicus carica46.5657.0684.46663forward
CNT30334104Solanum lycopersicumCynara cardunculus45.6528.5384.77650forward
CNT30114615Solanum lycopersicumEutrema salsugineum47.8969.5286.95682forward

Expression of CNT30510145

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVSELSTSKVMVFPVRVLTKICIPPRRRSTKWRVDSFWML*

>peptide 2 (95 aa)
STKLVQTVSGIVNGSKNKMLRTAIRKETTNCIFIKIPLLFTNEKQNGTKSENTLMILNDHHTNTTTTMGNRQRATDATRQPQLKNHHGDGGQDGG*

>peptide 3 (88 aa)
MEGRLLLDVVVSQGATILELLSSEDQPLLVWGDPFLILDLSLHVVNGVGAFHLQSDGLSGKSLNEDLHTTTETEHQMEGGLLLDVVVS*

>peptide 4 (53 aa)
MPSLSWILALTLSMVSELSTSRVIVLPVRVFTKICIPPRRRSTKWRVDSFWML*

Sequence

>CNT30510145
ATCAACTAAATTAGTGCAAACTGTAAGTGGTATAGTAAACGGAAGCAAAAACAAAATGCTCAGAACTGCAATCAGAAAAGAAACCACAAACTGCATATTC
ATAAAGATACCATTATTATTCACAAATGAGAAACAGAATGGAACAAAAAGCGAAAACACATTGATGATCCTTAACGACCATCATACAAACACAACCACCA
CAATGGGCAACAGACAACGGGCAACAGACGCAACCAGACAACCACAACTTAAAAACCACCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTCTGG
ATGTTGTAGTCAGCCAGGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCCTGGATCTTAG
CCTTCACGTTGTCAATGGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTAACGAAGATCTGCATACCACCACGGAGACGGAG
CACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTGCGGCCATCTTCCAACTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGG
GGAATGCCTTCCTTATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCAAGGGTAATCGTCTTACCCGTGAGAGTCTTCACGA
AGATCTGCATACCACCACGTAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCTAGAGTACGTCCGTCCTCCAACTGCTTTCC
AGCGAAGATAAGCCTTTGCTGATCCGGGGGAATTCCTTCCTTATCCTGGATCTTAGCCTTAACGTTGTCGATTGTATCAGAACTTTCCACCTCTAGGGTG
ATAGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCATCTGCAAAATTCATAAAAACAACAATCAGAACAACGAAAAAACTCAAATTATAAGGATTAAAA
CAACCTAAAACACAAGATAAAAACTCCAATTTTAGGGCTTTTTCATCAAAACAACCGGAGAAACTCAGATCTTAGGCCTTGAGAACCAAAGCGACATCAA
AAACACAAAATTCCATGGCTTTTTTAGTCAAATCAACCAGAAAAACTCCTATTTTAGGCCTTCTCATTAAACCGACGAAAAAAACTCGAATATAAACCTT
TAAAATCAAATCGACGGAAAAACACTCAAATTAGGGGCTTTCTCATCAAAACAACGAAAGGAACTCCAATTGTAGGCATTCTCCGACAAAACAACATGAA
AAAACTCAATTGTTAGGTATTTTCCATCAAAACAACCGAAAAAAACTCAAAATTTAGGGCTTTAACAGCACCTGATTAACTAAACTCAGAATCTAAACAA
ACAAAAACCAAAAAATAGAGAAAA