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Detailed information on CNT3050995


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG84|UBI4P_NICSY, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-151

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641270Cucumis sativusNymphaea colorata96.553.7882.681074forward
CNT30279021Cucumis sativusChenopodium quinoa87.7874.9282.8977forward
CNT30629220Cucumis sativusVigna unguiculata87.2489.9182.29971forward
CNT3044330Cucumis sativusPrunus dulcis81.474.0885.21906forward
CNT30169882Cucumis sativusPistacia vera96.552.0683.051074forward
CNT30637282Cucumis sativusCapsicum annuum92.6352.3683.711031forward
CNT3094992Cucumis sativusSolanum tuberosum83.1179.4784.11925forward
CNT30568725Cucumis sativusActinidia chinensis96.5992.6783.261075forward
CNT3086353Cucumis sativusVigna radiata95.649.6582.991064forward
CNT30538027Cucumis sativusBrassica napus96.4156.5982.761073forward
CNT30238962Cucumis sativusBrassica oleracea81.8547.1382.88911forward
CNT30311152Cucumis sativusCamelina sativa96.566.5882.121074forward
CNT3061767Cucumis sativusArabidopsis lyrata80.7755.0582.76899forward
CNT30608559Cucumis sativusGossypium raimondii93.9868.5582.61046forward
CNT30217449Cucumis sativusKalanchoe fedtschenkoi96.5971.2484.281075forward
CNT30652285Cucumis sativusRosa chinensis82.1275.186.65914forward
CNT30716337Cucumis sativusMalus domestica golden96.586.6885.381074forward
CNT30704857Cucumis sativusPrunus avium96.6868.1484.671076forward
CNT30642981Cucumis sativusCannabis sativa72.9672.3783.62812forward
CNT30110940Cucumis sativusOryza longistaminata94.2538.6883.411049forward
CNT30326890Cucumis sativusAsparagus officinalis81.9473.9183.11912forward
CNT30595410Cucumis sativusEragrostis curvula95.678.0182.421064forward
CNT30174695Cucumis sativusVigna angularis72.4277.3586.85806forward
CNT30111644Cucumis sativusFicus carica97.1275.8684.091081forward
CNT30334109Cucumis sativusCynara cardunculus96.4166.8182.671073forward
CNT30724005Cucumis sativusLupinus angustifolius77.8167.0883.83866forward

Expression of CNT3050995

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MPSLSWILAFTLSMVSDDSTSRVMVLPVRVFTKICMPPRRRRTRWRVDSFWML*

>peptide 2 (40 aa)
MVSELSTSRVMVFPVNVLTKICIPPRRRNTRWRVDSFWML*

>peptide 3 (40 aa)
MVSELSTSRVMVFPVNVLTKICIPPRRRNTRWRVDSFWML*

>peptide 4 (99 aa)
SPTPNNIHHHLKTTTETQDKVKGGLLLNVVISESPPIFKLLPSEDQPLLVRRDAFLVLNFSFHIIDRVGALHLQGDGLSSQGLNKNLHSTPETKHQMQG*

>peptide 5 (60 aa)
ITNTQQHPPPSKNHHGDAGQGEGWTPSECCNQRESSHLQAASQRRSTSAGPEGCLPCPEF*

Sequence

>CNT3050995
ATCACCAACACCCAACAACATCCACCACCATCTAAAAACCACCACGGAGACGCAGGACAAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAATCAGCGAG
AGTCCTCCCATCTTCAAGCTGCTTCCCAGCGAAGATCAACCTCTGCTGGTCCGGAGGGATGCCTTCCTTGTCCTGAATTTTAGCTTTCACATTATCGATC
GTGTCGGAGCTCTCCACCTCCAAGGTGATGGTCTTTCCAGTCAGGGTCTTAACAAAAATTTGCATTCCACCCCTGAGACGAAGCACCAAATGCAAGGTTG
ACTCCTTCTGAATGTTGTAATCAGCCAGAGTCCTTCCATCTTCAAGCTGCTTCCCAGCGAAGATCAACCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTC
TTGGATCTTAGCCTTGACGTTATCAATGGTGTCAGAGCTCTCAACCTCTAGGGTGATGGTCTTTCCGGTCAACGTCTTGACAAAAATCTGCATACCACCA
CGAAGACGCAACACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAATCGGCAAGGGTACGACCGTCCTCTAGTTGCTTACCGGCAAAGATAAGTCTTT
GTTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCAGAGCTCTCAACCTCTAGGGTGATGGTCTTTCCGGTCAA
CGTCTTGACAAAAATCTGCATACCACCACGAAGACGCAACACAAGGTGGAGGGTAGACTCCTTCTGGATGTTATAGTCGGCCAAAGTACGGCCATCCTCG
AGTTGCTTTCCAGCGAAGATAAGACGCTGTTGGTCTGGAGGAATGCCCTCTTTGTCCTGGATCTTGGCCTTTACGTTGTCGATGGTGTCAGACGACTCAA
CCTCAAGGGTGATGGTCTTGCCCGTCAGGGTTTTCACGAAAATCTGCATGCCACCACGAAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTT
GTAGTCGGCCAAGGTACGGCCATCCTCGAGTTGTTTTCCAGCGAAGATGAGACGTTGCTGATCCGGGGGAATTCCTTCCTTGTCCTGGATCTTGGCCTTG
ACGTTGTCGATCG