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Detailed information on CNT3050967


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3084586Cucumis sativusVigna radiata22.067.6683.49109forward

Expression of CNT3050967

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MMMMIKSCKDPTLTNETRPNPSDKRNLTKPNTPD*

>peptide 2 (37 aa)
PNEGKGSYCIISENKELEKENLKFGNLSKWTKRGRKK*

>peptide 3 (50 aa)
MDKEREKKIKDFKNKLQPGPDFLSSSIKSSQSPDTALNDDYKDDDDDQIM*

Sequence

>CNT3050967
TTCCGAATGAAGGAAAAGGGTCCTACTGCATTATTTCAGAAAATAAAGAGTTGGAAAAAGAAAATCTGAAATTTGGAAACTTATCGAAATGGACAAAGAG
AGGGAGAAAAAAATAAAAGACTTTAAAAATAAATTACAACCTGGCCCTGATTTTCTTTCATCTTCAATCAAATCATCGCAGAGTCCAGACACGGCACTCA
ACGACGACTACAAAGATGATGATGATGATCAAATCATGTAAAGATCCAACGCTCACAAATGAGACACGACCAAACCCATCCGATAAAAGAAACTTAACAA
AACCAAATACACCAGATTAAAAAGAAAAGAAAAGAGTGGCCGCCGTCGCTGCCGCGTCCGCCGTGGGTGGTGGTGGTGCTTGACTTAGTAGTCGGTGGTT
GGGAGTTGCTCGTGGGAGTTGGAGATGAAGATGAATTCGTAGATGAGACCAGCAAGGCCACCACCGATCAAAGGCCCGGCCCAGTAGATCCAGT